FC869199

Overview
NameFC869199
Unique NameFC869199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:1..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.340e-89
Identity = 161/211 (76.30%), Postives = 180/211 (85.31%), Query Frame = 1
Query:   52 MATTFFRRLAKATPIAFNEAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            MAT+FFRRLA++ PI F  AFG Q KS    FRF  GAIAA++GG SYY   S  NLV+LDQ  EETGPK ALNPDKW+ FKLQDTARVSHN+ LFRFSFDPSA+LGL VASC+LTRAPLG +AEG TKYV+RPYTPISD EAKG+FDLLIKVYP+GKMSQHFASLKPGDV+EVKGP+EK +YSPNMKKHIGMIAGG+G TPMLQV  AI+
Sbjct:    1 MATSFFRRLARSAPITFPVAFGSQSKSGSGAFRFSTGAIAALSGGFSYYYLTSGNNLVYLDQAKEETGPKTALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSAELGLHVASCLLTRAPLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIV 211          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 70/146 (47.95%), Postives = 93/146 (63.70%), Query Frame = 1
Query:  250 TGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            +G K  L P+++  F+L++   +SHN+ ++RF        LGL +   I     LG   EG  K VVR YTPIS  E KGHFDLLIK YP G +S++ A+LK G+ + VKGP   + Y+PNM +H GMI+GGTG TPMLQV  AI+
Sbjct:   27 SGSKKVLKPNEFQEFELEEKTVLSHNTAIYRFKLPRKTDILGLPIGQHI----SLGATIEGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKYVANLKVGEKMRVKGPKGAMVYTPNMVRHFGMISGGTGITPMLQVVKAII 168          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = 1
Query:  268 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S+H  +LK GDV++V+GP   + Y+PNM +HIGMIAGGTG TPMLQV  AI+
Sbjct:   57 LNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAII 192          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29
Identity = 78/174 (44.83%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  172 AVAGGVSYYCYFSSPNLVHLDQINEETGPKI--ALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            A+A GV Y    +S +         E G ++  AL+P ++  F+L++   V+HN+ +FRF+  +    LGL +   I  RA +G       K V RPYTPIS  E +G+FDLLIKVY +G MS +  ++  GD +EVKGP  K  Y PNM+K IGM+AGGTG TPMLQV  AIL
Sbjct:   15 ALAAGVKYVFTLTSGSNKDKKGGEAEKGKQVEKALDPQEYRKFQLKEKFIVNHNTRIFRFALPNEDDILGLPIGQHISLRAVVGG------KEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAIL 182          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28
Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            P+  LNP+++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTG TPMLQ+  AI+
Sbjct:   57 PRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAII 196          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28
Identity = 66/144 (45.83%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTG TPMLQ+  AI+
Sbjct:   40 PRKVLNPSEFQNFVLKEKTDISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAII 179          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28
Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            P+  LNP ++  F L+D   VSHN  ++RF+   P+  LGL +   I   A +     G +K +VR YTPIS  +  G+FDLL+K YP+G +S+H  +L+ GD ++V+GP   + Y+PNM +HIGMIAGGTG TPMLQV  AI+
Sbjct:   52 PRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATI----PGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAII 191          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            PK  L P  +  F+L++   +SHN  ++RF    P + LGL +   I   A + Q  +G+TK +VR YTPIS     G+FDLLIK YP G +S+H ASL+ G  + VKGP     Y+PNM +H GM+AGGTG TPMLQV  AI+
Sbjct:   54 PKKVLKPAVFQEFELKEKTIISHNVAIYRFKLPTPDSVLGLPIGQHISIGAAIEQP-DGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVIRAIV 196          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28
Identity = 66/144 (45.83%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTG TPMLQ+  AI+
Sbjct:   36 PRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAII 175          
BLAST of FC869199 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  256 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGYTPMLQVN*AIL 684
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAGGTG TPMLQ+  A++
Sbjct:   53 PRKVLNPTEFQEFVLKEKTDISHNVCIYRFALPRPADILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVI 192          
The following BLAST results are available for this feature:
BLAST of FC869199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
NCB5R_ARATH4.340e-8976.30NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]
NCB5R_PHANO6.591e-2947.95NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
NCB5R_ASPCL6.591e-2948.57NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_DICDI8.608e-2944.83NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_EMENI1.918e-2845.83NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_ASPTN1.918e-2845.83NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_COCIM2.505e-2846.53NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_NEUCR3.271e-2847.22NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
NCB5R_ASPOR5.580e-2845.83NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_NEOFI7.287e-2845.14NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]

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Properties
Property NameValue
Genbank descriptionC31009F01EF AbioticL1 Citrus clementina cDNA clone C31009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869199 ID=FC869199; Name=FC869199; organism=Citrus clementina; type=EST; length=684bp
GAGAGAAAGTGGTATACTTTTCTTTGCTTGCTTCTTCTCCAACATTAGAA
AATGGCTACGACCTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCAT
TCAACGAGGCATTTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGA
TTTCCCTTTGGAGCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTG
TTACTTTTCATCCCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGA
CGGGTCCAAAAATTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTG
CAAGACACTGCAAGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATT
TGATCCATCTGCCAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAA
GGGCTCCATTAGGACAAGATGCTGAAGGAAATACAAAATATGTTGTACGG
CCGTATACTCCTATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTT
AATTAAGGTTTATCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAA
AACCAGGGGATGTAGTTGAAGTGAAAGGACCCATCGAAAAGCTCCGATAC
TCTCCCAATATGAAGAAACACATCGGCATGATAGCTGGTGGCACAGGGTA
TACTCCTATGCTTCAGGTAAATTGAGCTATACTG
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