FC869201

Overview
NameFC869201
Unique NameFC869201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9477 contig Ccv1_Contig9477:1..630. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.850e-40
Identity = 88/188 (46.81%), Postives = 124/188 (65.96%), Query Frame = 2
Query:   62 SSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS---NNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHL 616
            SS  S+  D  R  +D+ PSIWGD F+N    +K  + E EKR + LK E+ K++V+   N+T      + +A ++ +QRLGV+YHF  EI++ L+ IY +        N D  NDLY  ++RFRLLR+HGY VS D+F KF+DE+G FK+ +T+D +GLL LY+ASYLRV GE+IL+EA  F+  HL
Sbjct:   11 SSPLSSNKDEMRPKADFQPSIWGDLFLNCP--DKNIDAETEKRHQQLKEEVRKMIVAPMANST------QKLAFIDSVQRLGVSYHFTKEIEDELENIYHN--------NNDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHL 182          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.416e-40
Identity = 88/188 (46.81%), Postives = 124/188 (65.96%), Query Frame = 2
Query:   62 SSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS---NNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHL 616
            SS  S+  D  R  +D+ PSIWGD F+N    +K  + E EKR + LK E+ K++V+   N+T      + +A ++ +QRLGV+YHF  EI++ L+ IY +        N D  NDLY  +LRFRLLR+HG+ VS D+F KF+DE+G FK+ +T+D +GLL LY+ASYLRV GE+IL+EA  F+  HL
Sbjct:   11 SSPLSSNKDEMRPKADFQPSIWGDLFLNCP--DKNIDAETEKRHQQLKEEVRKMIVAPMANST------QKLAFIDSVQRLGVSYHFTKEIEDELENIYHN--------NNDAENDLYTTSLRFRLLREHGFNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHL 182          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.382e-40
Identity = 88/188 (46.81%), Postives = 123/188 (65.43%), Query Frame = 2
Query:   62 SSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS---NNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHL 616
            SS  S+  D  R  +D+ PSIWGD F+N    +K  +   EKR + LK E+ K++V+   N+T      + +A ++ +QRLGV+YHF  EI++ L+ IY +        N D  NDLY  +LRFRLLR+HGY VS D+F KF+DE+G FK+ +T+D +GLL LY+ASYLRV GE+IL+EA  F+  HL
Sbjct:   11 SSPLSSNKDEIRPKADFQPSIWGDFFLNCP--DKNIDAGTEKRHQQLKEEVRKMIVAPMANST------QKLAFIDSVQRLGVSYHFTKEIEDELENIYHN--------NNDAENDLYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHL 182          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.566e-39
Identity = 87/185 (47.03%), Postives = 123/185 (66.49%), Query Frame = 2
Query:   62 SSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHL 616
            SS  S+  D  R  +D+ PSIWGD F+N    +K  + E +KR + LK E+ K++V+   A  TL+  +A ++ +Q LGV+YHF  EI++ L+ IY +        N D  NDLY  +LRFRLLR+HG+ VS D+F KF+DE+G FK+ +T+D +GLL LY+ASYLRV GE+IL+EA  F+  HL
Sbjct:   11 SSPLSSNKDEMRPKADFQPSIWGDFFLNCP--DKNIDAETQKRHQQLKEEVRKMIVAP-MANSTLK--LAFIDSVQGLGVSYHFTKEIEDELENIYHN--------NNDAENDLYTTSLRFRLLREHGFHVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHL 182          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.570e-37
Identity = 85/199 (42.71%), Postives = 118/199 (59.30%), Query Frame = 2
Query:   41 RDVKSVLSSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNND------LYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLK 619
            R V+ +++++ ST  D+ RRS++Y PSIW   +I  S   +Y      ++   LK ++  +L       + LE    ++  LQRLG++YHFE EIK  L  +Y          N DH  D      LY  AL+FRLLRQHGY VS ++F  F+DE+G FKA L  D KG+L LYEAS+  ++GENILEEA +FS KHL+
Sbjct:   39 RPVQCMVANKVSTSPDILRRSANYQPSIWNHDYIE-SLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLE----LIEILQRLGLSYHFEEEIKRILDGVY----------NNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLE 222          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.570e-37
Identity = 83/187 (44.39%), Postives = 116/187 (62.03%), Query Frame = 2
Query:   56 VLSSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHL 616
            VL+S     +  NR  +D+HP IWGD FI     +    TE++  +E LKA++ K+++          + +  ++ +QRLGV+YHFE EI++ L+ IY    N + D       DLY  ALRFRLLR+HG+ +S D F KF+DE G FKA LT+D +GLL LYEASY+RV GE+IL+EA  F+   L
Sbjct:    8 VLASPHPAISSENRPKADFHPGIWGDMFIICPDTDIDAATELQ--YEELKAQVRKMIME---PVDDSNQKLPFIDAVQRLGVSYHFEKEIEDELENIYRDTNNNDADT------DLYTTALRFRLLREHGFDISCDAFNKFKDEAGNFKASLTSDVQGLLELYEASYMRVHGEDILDEAISFTTAQL 183          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.395e-32
Identity = 81/202 (40.10%), Postives = 125/202 (61.88%), Query Frame = 2
Query:   29 VGVMRDVKSV--LSSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLL 628
            + +M   K V  L S +     V+RRS++Y PSIW DH    S N  YT+   ++R E L+ +++   ++     + L+++  +++ LQRLG+A+ FE EI+  L  IY    N N D N+   N LY  +L FRLLRQHGY VS ++F  F+D++G F   + +D KG+L L+EASY  ++GE+I+EEA +F+ KHLK ++
Sbjct:   29 IRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIW-DHDFLQSLNSNYTDEAYKRRAEELRGKVK---IAIKDVIEPLDQL-ELIDNLQRLGLAHRFETEIRNILNNIY----NNNKDYNWRKEN-LYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVM 217          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 5.395e-32
Identity = 73/179 (40.78%), Postives = 110/179 (61.45%), Query Frame = 2
Query:   86 DVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKS 622
            ++ R  +D+ PS+WGD F++ S   +    +  K  E LK +   +L++       L + + +++ ++RLG++YHFE EI + L  IY+   N NC       NDL   AL+FRLLRQHG+ +S +IF KF+DE G+FK  L +D  GLL LYEAS++R   ++ILE+A  FS  HL+S
Sbjct:   12 EIVRPVADFSPSLWGDQFLSFSIKNQVAE-KYAKEIEALKEQTRNMLLATGMK---LADTLNLIDTIERLGISYHFEKEIDDILDQIYNQ--NSNC-------NDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLES 177          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.677e-31
Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 2
Query:   53 SVLSSRESTKADVNRRSSDYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTN-DAKGLLCLYEASYLRVQGENILEEACEFSRKHLK 619
            S+  S  S  + + RRS++Y P IW   FI  S   KY       R   LK E++K+LV    +   LE    +++ LQRLG++YHFENEI   L+  +      N   N +   DLY  AL FRLLR++GY +  +IF  F+DE G+FKA + N D KG+L LYEAS+    GENILEEA  F+ ++LK
Sbjct:   57 SLAKSPSSDTSTIVRRSANYDPPIWSFDFIQ-SLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLE----LIDTLQRLGISYHFENEIISILKEYFT-----NISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLK 236          
BLAST of FC869201 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.790e-31
Identity = 70/171 (40.94%), Postives = 113/171 (66.08%), Query Frame = 2
Query:  110 YHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKS 622
            + P++WG+ F +++ N     +  ++R   LK +++ +L+S+ +      E V +++ L RLGV+YHFEN+I+E L  I++S      D+  +   DLY  A+ FR+ RQHG+K+S+D+F KF+D  G+FK  L  DAKG+L L+EAS+L V GE+ILEEA  F++ +L+S
Sbjct:   69 FPPTVWGNRFASLTFNPSEFES-YDERVIVLKKKVKDILISSTS---DSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQP----DLVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQS 231          
The following BLAST results are available for this feature:
BLAST of FC869201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DCS1_GOSAR1.850e-4046.81(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS2_GOSAR2.416e-4046.81(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS4_GOSAR5.382e-4046.81(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS1_GOSHI1.566e-3947.03(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
MYRS_QUEIL5.570e-3742.71Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
DCS3_GOSAR5.570e-3744.39(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
RLC1_CITLI5.395e-3240.10(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
5EAS_TOBAC5.395e-3240.78Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
TPS2_CANSA2.677e-3142.63(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
CASS_RICCO7.790e-3140.94Casbene synthase, chloroplastic OS=Ricinus communi... [more]

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Properties
Property NameValue
Genbank descriptionC31009F03EF AbioticL1 Citrus clementina cDNA clone C31009F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869201 ID=FC869201; Name=FC869201; organism=Citrus clementina; type=EST; length=630bp
TTGAGAGAACTTGAAAGAATTAGGGGTTGTTGGGGTTATGAGGGATGTTA
AGAGTGTTCTTTCTTCAAGAGAAAGCACGAAGGCCGATGTGAACCGTCGA
TCCTCGGATTATCATCCTAGCATTTGGGGTGATCATTTCATTAATGTGTC
ATCAAATGAAAAGTACACCAATACGGAAGTCGAAAAGCGGTTTGAAACAT
TAAAAGCAGAAATTGAAAAGTTGCTGGTGAGCAATAATACAGCATGGAAA
ACACTTGAAGAAATTGTGGCTATTGTTAATCAACTTCAACGCCTTGGTGT
GGCCTATCATTTTGAAAATGAGATCAAAGAGGCCTTACAAACAATCTATG
ATAGCCATGTTAACGGCAATTGTGATGTTAATTACGATCATAATAACGAT
CTCTACATAGTTGCTCTTCGATTTCGGCTTCTAAGGCAGCATGGTTACAA
GGTGTCAGCAGATATATTTAAAAAATTCAGAGATGAAAAAGGTGAATTCA
AGGCCATGTTAACAAATGACGCGAAAGGCTTGCTATGTTTGTATGAGGCG
TCATATCTGAGAGTACAAGGGGAGAATATATTGGAAGAAGCATGTGAATT
TTCTAGGAAGCACTTAAAATCTTTATTGTC
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