FC869213

Overview
NameFC869213
Unique NameFC869213
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869213 vs. ExPASy Swiss-Prot
Match: BCAL3_ARATH (Branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=At5g57850 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.703e-50
Identity = 110/178 (61.80%), Postives = 127/178 (71.35%), Query Frame = 1 
Query:   94 KLTHHVKNLPVFSPNLCFSRTGSFGEMRFIRSCGRTEALI---DSSAQLSDVPLLSCSEAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRESLRRILIQTVSASKCRKGSLRYWLSAGVGDF 618
            + T +  NL   S   C  R G     RF R   R   ++   DSS+Q  +VP+LS  E  ER+K  +  Q    QFLAMYSS+  GITTDPAAMV+P+DDHMVHRGHGVFDTA I +GYLYELDQHLDRI+RSASMAKI LPFDRE+++RILIQTVS S CR GSLRYWLSAG GDF
Sbjct:    7 EFTVNTWNLRSLSQVPCPLRHG----FRFPRRLTRRRTILMCSDSSSQSWNVPVLSSYEVGERLKLARGGQ----QFLAMYSSVVDGITTDPAAMVLPLDDHMVHRGHGVFDTALIINGYLYELDQHLDRILRSASMAKIPLPFDRETIKRILIQTVSVSGCRDGSLRYWLSAGPGDF 176
The following BLAST results are available for this feature:
BLAST of FC869213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BCAL3_ARATH5.703e-5061.80Branched-chain-amino-acid aminotransferase-like pr... [more]
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Properties
Property NameValue
Genbank descriptionC31009G03EF AbioticL1 Citrus clementina cDNA clone C31009G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869213 ID=FC869213; Name=FC869213; organism=Citrus clementina; type=EST; length=723bp
GGAATCTTCATCTATCTCAGCGCTCTTCTTTCAGCTCCCGATCCCATGGC
TTCTCTCGCAAAAACCATCTCTCAAAACCAACCTGTTCCCACTAAACTCA
CTCATCATGTCAAGAACTTGCCTGTATTTTCTCCAAATCTTTGCTTTTCA
AGAACTGGGTCGTTCGGAGAAATGAGATTCATTAGAAGTTGTGGCCGAAC
CGAAGCATTGATTGATTCAAGTGCTCAATTATCTGATGTTCCACTTCTAT
CTTGCTCAGAGGCCATTGAAAGAATAAAGTCAACCCAAGCAAACCAGAAA
AGCAAGCAGCAATTTTTAGCCATGTACTCGAGCATTTTTGGAGGAATAAC
AACAGATCCAGCTGCTATGGTGATTCCTATGGACGATCATATGGTCCACA
GAGGGCATGGTGTTTTTGATACTGCTGCAATATGTGATGGATACCTCTAT
GAATTAGACCAACACCTTGATCGTATTATAAGGTCAGCATCCATGGCCAA
AATTCAACTTCCTTTTGATCGAGAAAGTTTAAGGAGAATACTCATACAGA
CTGTGAGTGCTTCCAAGTGTAGAAAAGGGTCATTGAGATACTGGCTTTCA
GCTGGAGTGGGTGATTTCCATTATCTCCAGTTGGCTGCCATCAATCAACA
TTCTATGTGATTGAAATTCAGATGACTCACCATTTGNTTCAAAAGGTGTA
AAAGTATAACTTCATCTATCCCA
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