FC869221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RK10_ARATH (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana GN=RPL10 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.884e-63 Identity = 116/152 (76.32%), Postives = 130/152 (85.53%), Query Frame = 1 Query: 238 IRAAISRXXXXXXXXXXXXHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPAI 693 IR+A+SR HLENCHL+AAI YKG TVKQFQDLRR+LP+ TKLIVAKNTLV+KAIEGT+WEALKPCM GMNAWLFV T+EIP+AIKPYR+FQKE+KLE NDFAGAVFEGKFYAP +FK LE+MPTRAE+YAK LGALQ PAI Sbjct: 39 IRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLETMPTRAEVYAKMLGALQSPAI 190
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RK10_TOBAC (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.408e-60 Identity = 112/163 (68.71%), Postives = 129/163 (79.14%), Query Frame = 1 Query: 202 HPSKRSKPPPTHIRAAISRXXXXXXXXXXXXHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 HP + K IR+AISR LE+C+L+A I YKG TVKQFQ+LR LP+ TKL+VAKNTLV KAIEGT+WEALKPCM GMNAWLFVH+EEIPAA+KPYR FQKEKKLEENDF GAVFEGKFY P +FKALE++PTRAEIYA+ LG+L+GPA Sbjct: 33 HPHFKPKSKNLTIRSAISRTKKEETVETVKQQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMKGMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTRAEIYAQLLGSLKGPA 195
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROMP (50S ribosomal protein L10 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplJ PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L++ + + YKG T+K+ DLR L N + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQKE K E GA+FEG+ + + K + S+P+R + AK GAL G A Sbjct: 19 LDDSEMAVVLDYKGLTIKEMSDLRSRLQTNNGICKVTKNSLMRKAIDGNSNWTDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKETKKSETK--GALFEGRLLSESEIKEIASLPSREVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM5 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplJ PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L++ + + YKG T+K+ DLR L N + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQKE K E GA+FEG+ + + K + S+P+R + AK GAL G A Sbjct: 19 LDDSEMAVVLDYKGLTIKEMSDLRSRLQTNKGICKVTKNSLMRKAIDGNSNWTDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKETKKSETK--GALFEGRLLSQSEIKEIASLPSREVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROMS (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain AS9601) GN=rplJ PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 46/133 (34.59%), Postives = 78/133 (58.65%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L++ + + YKG T+K+ DLR L + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG+ + + K + S+P++ + AK GAL G A Sbjct: 19 LDDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGDSNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSETK--GALFEGRLLSDSEIKEIASLPSKEVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM0 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplJ PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 46/133 (34.59%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L + + + YKG T+K+ DLR L + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG+ + + K + S+P++ + AK GAL G A Sbjct: 19 LNDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGDSNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSETK--GALFEGRLLSDSEIKEIASLPSKEVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM9 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplJ PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 46/133 (34.59%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L + + + YKG T+K+ DLR L + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG+ + + K + S+P++ + AK GAL G A Sbjct: 19 LNDSEMAVVLDYKGLTIKEMSDLRSRLQTTNGICKVTKNSLMRKAIDGDSNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSETK--GALFEGRLLSNSEIKEIASLPSKEVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM2 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplJ PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 46/133 (34.59%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L + + + YKG T+K+ DLR L + V KN+L+ KAI+G + W L+ ++G NA++ + E++ A+K ++FQK+ K E GA+FEG+ + + K + S+P++ + AK GAL G A Sbjct: 19 LNDSEMAVVLDYKGLTIKEMSDLRSRLRTTNGICRVTKNSLMRKAIDGDSNWNDLESLLTGTNAFVLIK-EDVGGAVKAIQSFQKDTKKSETK--GALFEGRLLSDSEIKEIASLPSKEVLMAKIAGALNGVA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_PROM4 (50S ribosomal protein L10 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplJ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 298 LENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAIEG-TQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 L+ + I Y+G T+K+ DLR L P + V KNTL+ KAI+G T W +L+ ++G NA++ V + + A+K + FQKE K + G +FEGK + + KA+ ++PT+ + A+ GAL A Sbjct: 19 LDQAEMALVIDYQGLTIKEMSDLRTRLGPSSGICKVTKNTLMRKAIDGDTSWSSLESLLNGTNAFVLVKGD-VGGALKAVQAFQKETKKSKTK--GGLFEGKLLSQDEIKAIANLPTKEVLMAQIAGALNSIA 148
BLAST of FC869221 vs. ExPASy Swiss-Prot
Match: RL10_TRIEI (50S ribosomal protein L10 OS=Trichodesmium erythraeum (strain IMS101) GN=rplJ PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 295 HLENCHLIAAIKYKGFTVKQFQDLRRSL-PENTKLIVAKNTLVYKAI-EGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKXLGALQGPA 690 +L L I Y+G +V + DLRR L P + +AKNTL+ A+ E + W+ ++ ++G NA+LF+ + I AIK Y++FQK K + +F G V EG+ KA+ +P++ E+ A+ GA+ A Sbjct: 18 NLSESQLALVINYQGLSVAEITDLRRRLIPTGSICSIAKNTLMGIAVKEDSNWQPMEDLLAGSNAFLFLKND-IGGAIKAYQDFQKATK--KTEFKGGVMEGRLLDKDQVKAIADLPSKEELLAQVAGAINNIA 148 The following BLAST results are available for this feature:
BLAST of FC869221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869221 ID=FC869221; Name=FC869221; organism=Citrus clementina; type=EST; length=693bpback to top |