FC869222

Overview
NameFC869222
Unique NameFC869222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14420 contig Ccv1_Contig14420:173..834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.966e-36
Identity = 79/168 (47.02%), Postives = 105/168 (62.50%), Query Frame = 1
Query:   52 GGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEV 555
            GGL AYV+G+  S  AV+L SDV+GYEAP LR++ DKVA AG++V VPDF  GD    D  K   EW++ H   K  E+AKP+  ALK +G  ++   G+CWG K+ V++GK   ++A  L HP  VT DD+K V+ P+ ILGA+ D  +PP  V  F   L    EV
Sbjct:   55 GGLRAYVSGAASSSRAVVLASDVFGYEAPLLRQIVDKVAKAGYFVVVPDFLKGD--YLDDKKNFTEWLEAHSPVKAAEDAKPLFAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVLRERHEV 219          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.514e-19
Identity = 67/214 (31.31%), Postives = 106/214 (49.53%), Query Frame = 1
Query:   34 GHVAKLGGLNAYVTGSPDSK-LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG-DPYVADGGK-PLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVR----YNVEDESAVKAAEE 648
            G   ++  + AYV+    S   AV+++ D++G++ PN R +AD + A G+    PDFF G +P+     +    EW++     K  +E   V++ LK +  +  IG  GFCWG  V   L  K   ++A V  +     V+D   +  P   + AE+D + P   V   EE L   S+VD  VK+FPK  HG+  R     N ED+  ++ A +
Sbjct:   22 GQEVQIEHIKAYVSKPHSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEMDHVIPLEQVSLLEEKLKVHSKVDFQVKVFPKQTHGFVHRKNEDINPEDKPFIEEARK 235          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: AIM2_YEAST (Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   34 GHVAKLGGLNAYVTGSPDSKLAVLLI-SDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQ--LGKREFIQAAVLLHPSFVTVDDIKGVE--VPLSILGAEIDRLSPPALVKEFEEAL---NAISEVDSFVKIFPKVAHGWTVRYNVEDESAVKAAEE 648
            G   ++ GL+ Y  GS   K  V++I +DVYG +  N+   ADK A+AG+ V VPD   GD   +D       W + H  +   +     ++ LK +     IG  G+C+GAK  VQ   G      AA + HPSFV++++I+ ++   P+ I  AE D + P  L    EE L   +A  ++D    +F  VAHG+  R ++    AVK A+E
Sbjct:   22 GRREEIFGLDTYAAGSTSPKEKVIVILTDVYGNKFNNVLLTADKFASAGYMVFVPDILFGDAISSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFPANLRHLTEEKLKDNHATYQLD----LFSGVAHGFAARGDI-SIPAVKYAKE 230          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_XENLA (Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.729e-18
Identity = 65/214 (30.37%), Postives = 104/214 (48.60%), Query Frame = 1
Query:   34 GHVAKLGGLNAYVTGSPDSK-LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDP--YVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVR----YNVEDESAVKAAEE 648
            G   ++  + AYV+    S   AV+++ D++G++ PN R +AD + A G+    PDFF G      ++      EW++     K  +E   V++ LK +  +  IG  GFCWG  V   L  K   ++A V  +     V+D   +  P   + AEID + P   V   E+ L   S+VD  +K+FPK  HG+  R     N ED+  ++ A +
Sbjct:   22 GQEIQIEHIKAYVSKPHSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQESWKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEIDHVIPLEQVSLLEQKLKVHSKVDFQIKVFPKQTHGFVHRKKEDINPEDKPFIEEARK 235          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18
Identity = 68/216 (31.48%), Postives = 104/216 (48.15%), Query Frame = 1
Query:   28 GAGHVAKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG-DPYVADGG-KPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQ-LGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVRYNVEDESAVKA-AEEAHQ 657
            G GH  ++  + AYVT SP D+  AV+++ D++G++ PN R +AD +A  G+   VPDFF G +P+   G       W+K     K   E   V++ L+ +     IG  GFCWG  VV Q +     I+A V ++      +D+  ++ P   + AE D + P   V    + L     V+  VK F    HG+  R   +   A K   EEA +
Sbjct:   20 GMGHEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVVHQVMTAYPDIRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDTVIPLEQVSTLTQKLKEHCIVNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARR 235          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.157e-17
Identity = 62/198 (31.31%), Postives = 97/198 (48.99%), Query Frame = 1
Query:   28 GAGHVAKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG-DPYVADGGKPL-QEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQL-GKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVR 606
            G G   ++  + AYVT SP D+  AV++I D++G++ PN R +AD ++  G+   VPDFF G +P+   G   +  EW+K     K   E   +++ LK +     IG  GFCWG   V  L  K    +A V ++      +DI  ++ P   + AE D + P   V    + L    +V+  +K F    HG+  R
Sbjct:   20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKEHCKVEYQIKTFSGQTHGFVHR 217          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.385e-17
Identity = 62/198 (31.31%), Postives = 97/198 (48.99%), Query Frame = 1
Query:   28 GAGHVAKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG-DPYVADGGKPL-QEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQL-GKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVR 606
            G G   ++  + AYVT SP D+  AV++I D++G++ PN R +AD ++  G+   VPDFF G +P+   G   +  EW+K     K   E   +++ LK +     IG  GFCWG   V  L  K    +A V ++      +DI  ++ P   + AE D + P   V    + L    +V+  +K F    HG+  R
Sbjct:   20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKEHCKVEYQIKTFSGQTHGFVHR 217          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.776e-16
Identity = 66/216 (30.56%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   28 GAGHVAKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG-DPYVADGG-KPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQ-LGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGWTVRYNVEDESAVKA-AEEAHQ 657
            G G   ++  + AYVT SP D+  AV+++ D++G++  N R +AD +A  G+   VPDFF G +P+   G      EW+K     K   E   V++ LK +     IG  GFCWG  VV   +     ++A V ++      +D+  ++ P   + AE D + P   V    + L     V+  VK F    HG+  R   +   A K   EEA +
Sbjct:   20 GMGQEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVVHHVMTTYPEVRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDAVIPLEQVSILIQKLKEHCIVNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARR 235          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: YB4E_SCHPO (Uncharacterized AIM2 family protein C30D10.14 OS=Schizosaccharomyces pombe GN=SPBC30D10.14 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12
Identity = 59/219 (26.94%), Postives = 96/219 (43.84%), Query Frame = 1
Query:   40 VAKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPL----QEWIKDH-----GVDKGFEEAKPVIQALKSKG--ITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNA-ISEVDSFVKIFPKVAHGW-TVRYNVEDESAVKAAEEAHQ 657
            +   GGL  YV GS  +   ++   D++G  +  +++ ADK+A  GF V +PDF  G P       P     Q+   D        +  + +   V++A+++       IG  GFCWGAKV+V              HPSF    D   V  P+  L ++ +      ++KE+EEA     +   S  + F  + HGW   R ++ +    K  +E +Q
Sbjct:   25 IENFGGLTTYVVGSTSNTRVLIGFMDIFGL-SDQIKEGADKLADDGFTVYLPDFLEGKPLPVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKVVEAVRANHGPNVTIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCPVLFLCSKDE---DAKIIKEWEEAFKTNPAYAKSSFETFSDMFHGWMAARADLSNPEQRKRFDEGYQ 239          
BLAST of FC869222 vs. ExPASy Swiss-Prot
Match: YI7F_SCHPO (Uncharacterized AIM2 family protein C977.15 OS=Schizosaccharomyces pombe GN=SPAC977.15 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 58/215 (26.98%), Postives = 98/215 (45.58%), Query Frame = 1
Query:   49 LGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG--------DPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS--KGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL-GAEIDRLSPPALVKEFEEALNAISEVDSFVKIFPKVAHGW-TVRYNVEDESAVKAAEEAHQ 657
            +GG+  Y TG   SK+ ++   DV+G  +  +++ AD++A     + +PDF +G        DP   +  +   ++++       + +   VI+ ++        IGA GFCWGAKV++    +E        HPS +   D K V  P+  L   + D     A  K FE   N+    +S+ + F K+ HGW   R N+ D    K  +  +Q
Sbjct:   27 IGGMQTYFTGKRSSKVVLIGFMDVFGL-SKQIKEGADQLANHELAIYLPDFLNGETASIEMIDPKTIEQKEARSKFMEKISSPLHWPKLTKVIEDIERIHGQDVKIGAYGFCWGAKVLITYPNKERFLRIGCAHPSLLDPVDAKHVHCPVCFLCSKDEDPEEVDAWKKSFE---NSPYFSESYFETFGKMHHGWMAARANLSDPENRKYFDLGYQ 237          
The following BLAST results are available for this feature:
BLAST of FC869222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
E134_MAIZE3.966e-3647.02Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=... [more]
CMBL_XENTR7.514e-1931.31Carboxymethylenebutenolidase homolog OS=Xenopus tr... [more]
AIM2_YEAST1.674e-1833.64Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 P... [more]
CMBL_XENLA3.729e-1830.37Carboxymethylenebutenolidase homolog OS=Xenopus la... [more]
CMBL_MOUSE6.361e-1831.48Carboxymethylenebutenolidase homolog OS=Mus muscul... [more]
CMBL_HUMAN3.157e-1731.31Carboxymethylenebutenolidase homolog OS=Homo sapie... [more]
CMBL_PONAB5.385e-1731.31Carboxymethylenebutenolidase homolog OS=Pongo abel... [more]
CMBL_RAT7.776e-1630.56Carboxymethylenebutenolidase homolog OS=Rattus nor... [more]
YB4E_SCHPO3.993e-1226.94Uncharacterized AIM2 family protein C30D10.14 OS=S... [more]
YI7F_SCHPO6.812e-1226.98Uncharacterized AIM2 family protein C977.15 OS=Sch... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31009H01EF AbioticL1 Citrus clementina cDNA clone C31009H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869222 ID=FC869222; Name=FC869222; organism=Citrus clementina; type=EST; length=662bp
AATCCACCGACATTGAATCCAAACAGTGGAGCAGGTCATGTTGCCAAACT
TGGTGGACTCAACGCTTATGTCACTGGCTCTCCTGATTCCAAGCTTGCCG
TTCTTCTCATTTCCGACGTTTATGGTTATGAAGCTCCAAACTTGAGGAAG
CTTGCAGACAAGGTTGCAGCAGCTGGATTCTACGTGGCAGTTCCTGACTT
CTTTCATGGGGATCCATATGTAGCTGATGGTGGGAAACCTCTACAAGAAT
GGATAAAAGATCATGGTGTGGATAAGGGATTTGAAGAGGCAAAGCCAGTT
ATTCAAGCTCTTAAGAGTAAAGGTATAACTGCAATTGGGGCTGCGGGCTT
CTGCTGGGGCGCTAAAGTGGTTGTTCAACTAGGAAAACGTGAGTTCATCC
AAGCTGCTGTGCTGTTACATCCCTCTTTTGTCACTGTAGATGATATCAAG
GGGGTTGAGGTTCCCCTTTCAATTCTAGGAGCCGAAATTGATCGCTTGTC
TCCACCAGCTCTCGTGAAGGAATTTGAAGAGGCCTTAAATGCCATATCTG
AGGTTGATAGCTTTGTGAAAATATTTCCTAAAGTGGCTCATGGATGGACA
GTGAGATATAATGTAGAAGATGAATCTGCTGTGAAGGCTGCAGAGGAAGC
CCATCAAACTTG
back to top