FC869224

Overview
NameFC869224
Unique NameFC869224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9483 contig Ccv1_Contig9483:1..633. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.116e-93
Identity = 156/203 (76.85%), Postives = 186/203 (91.63%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+TAG ++ C+AAVAWEAGKPL+I++VEVAPP+  EVRIKI +TSLC TD+YFWE+KGQ PLFPRI+GHEA G+VES+GEGV+DL+ GDHVLPVFTGEC DC HC+S+ SNMCDLLRIN+ RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINP APLDKVC+LSCG+STGLGATLNVAKP++GS+VAVFG
Sbjct:    1 MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVAKPKKGSTVAVFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.116e-93
Identity = 156/203 (76.85%), Postives = 184/203 (90.64%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G ++ CKAAVAWEAGKPL++++V+VAPP+ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEAAG+VES+GEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN+ RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +GSSVA+FG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.116e-93
Identity = 156/203 (76.85%), Postives = 184/203 (90.64%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G ++ CKAAVAWEAGKPL++++V+VAPP+ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEAAG+VES+GEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN+ RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +GSSVA+FG
Sbjct:    1 MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.457e-93
Identity = 156/203 (76.85%), Postives = 184/203 (90.64%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G ++ CKAAVAWEAGKPL++++V+VAPP+ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEAAG+VES+GEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN+ RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGATLNVAKP +GSSVA+FG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 2.485e-93
Identity = 156/203 (76.85%), Postives = 183/203 (90.15%), Query Frame = 2
Query:   23 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            MS+T G ++ CKAAVAWEAGKPL++++V+VAPP+ MEVR+KI YTSLC TD+YFWE+KGQ P+FPRI GHEAAG+VES+GEGV+DL  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN+ RGVML DG+SRFSING P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+STGLGA+LNVAKP +GSSVA+FG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFG 203          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 3.246e-93
Identity = 158/201 (78.61%), Postives = 183/201 (91.04%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            ST G I+ CKAAVAWEAGKPL+I++VEVAPP+  EVRIKI +TSLC TD+YFWE+KGQTPLFPRIFGHEA G+VES+GEGV+DL+ GDHVLP+FTGECG+CRHC S+ SNMCDLLRIN+ RG M+ DG+SRFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+STGLGATLNVAKP++G SVA+FG
Sbjct:    2 STTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.233e-92
Identity = 154/202 (76.24%), Postives = 184/202 (91.09%), Query Frame = 2
Query:   26 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            S+TAG ++ CKAAVAWEAGKPL+I++VEVAPP+ MEVR+KI +TSLC TD+YFWE+KGQTPLFPRIFGHEA G+VES+GEGV+DL+ GDHVLPVFTGEC  CRHC+S+ SNMCDLLRIN+ RGVM+ DGQ+RFS +G+P+ HF+GTSTFSEYTV HSGCV KI+P APLDKVC+LSCG+STGLGATLNVAKP +GS+VA+FG
Sbjct:    3 SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFG 204          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 2.748e-92
Identity = 152/201 (75.62%), Postives = 183/201 (91.04%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEAGKPL I++VEVAPP+ MEVR+KI YTSLC TD+YFWE+KGQTP+FPRIFGHEA G++ES+GEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+VRGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGA++NVAKP +GS+VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 3.589e-92
Identity = 152/201 (75.62%), Postives = 182/201 (90.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEA KPL+I++VEVAPP+ MEVR+KI +TSLC TD+YFWE+KGQTP+FPRIFGHEA G+VES+GEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+ RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGAT+NVAKP +GS+VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFG 202          
BLAST of FC869224 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 3.589e-92
Identity = 152/201 (75.62%), Postives = 182/201 (90.55%), Query Frame = 2
Query:   29 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPKTMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESLGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINSVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 631
            +TAG ++ CKAAVAWEA KPL+I++VEVAPP+ MEVR+KI +TSLC TD+YFWE+KGQTP+FPRIFGHEA G+VES+GEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN+ RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+STGLGAT+NVAKP +GS+VA+FG
Sbjct:    2 ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFG 202          
The following BLAST results are available for this feature:
BLAST of FC869224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ADH_MALDO1.116e-9376.85Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH3_SOLTU1.116e-9376.85Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.116e-9376.85Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU1.457e-9376.85Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLLC2.485e-9376.85Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_ARATH3.246e-9378.61Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PETHY1.233e-9276.24Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_PENAM2.748e-9275.62Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_ORYSJ3.589e-9275.62Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI3.589e-9275.62Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionC31009H03EF AbioticL1 Citrus clementina cDNA clone C31009H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869224 ID=FC869224; Name=FC869224; organism=Citrus clementina; type=EST; length=633bp
ATTCTCATTGGGAACCTCACCAATGTCGAGCACTGCTGGTCTTATTCTTA
CCTGCAAAGCGGCGGTTGCTTGGGAAGCAGGGAAGCCGCTGATCATTCAG
GATGTGGAGGTTGCTCCTCCAAAGACCATGGAAGTGAGGATCAAGATCAA
ATACACCTCTCTTTGCCGCACTGATCTCTATTTCTGGGAGTCCAAGGGTC
AGACACCCTTGTTTCCTCGCATATTTGGGCATGAAGCAGCAGGGGTTGTG
GAAAGTCTTGGGGAAGGTGTTTCAGACCTTGAAGTAGGGGATCATGTACT
CCCGGTATTTACAGGGGAGTGTGGGGATTGTAGACACTGCAGGTCCGATG
TAAGCAATATGTGTGACCTTTTGAGAATAAACTCAGTCAGGGGAGTCATG
CTTGCTGATGGACAATCTAGGTTTTCGATCAATGGGGAGCCTGTAAATCA
CTTCCTTGGAACATCCACCTTTAGCGAGTACACTGTCGTTCATTCAGGCT
GCGTTGCAAAGATCAATCCTCTGGCACCTTTGGATAAAGTCTGCATTCTC
AGTTGTGGCGTCTCAACAGGGCTAGGTGCAACTCTAAATGTGGCAAAACC
TGAAAGGGGTTCGTCAGTCGCTGTCTTTGGCCT
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