FC869225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ARATH (Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana GN=HEMC PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.938e-64 Identity = 129/179 (72.07%), Postives = 142/179 (79.33%), Query Frame = 3 Query: 198 CYPGSVSLVGFSSPRLKTPSFPKSLKKRSF-GLVRASAAVE--TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 C GSVS +GFS P++ +P+ K +K+S G V+A AVE T+ AIIRIGTRGSPLALAQA+ETR KL HPEL ++GAI I IIKTTGDKILSQPLADIGGKGLFTKEIDEALIN IDIAVHSMKDVPTYLPEKTILPCNL REDVRDAFI PAGS+VGTASLRR Sbjct: 27 CSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVGTASLRR 205 HSP 2 Score: 23.483 bits (49), Expect = 5.938e-64 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 722 KKSQILHRYPS 754 +KSQILH+YP+ Sbjct: 205 RKSQILHKYPA 215
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PEA (Porphobilinogen deaminase, chloroplastic OS=Pisum sativum GN=HEMC PE=1 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.773e-60 Identity = 119/149 (79.87%), Postives = 126/149 (84.56%), Query Frame = 3 Query: 294 VRASAAVE-----TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 +RAS AVE K A+IRIGTRGSPLALAQAHETR+KLMA H ELA+EGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALIN IDIAVHSMKDVPTYLPE+TILPCNL REDVRDAFI PAGS++GTASLRR Sbjct: 44 IRASLAVEQQTQQNKTALIRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRR 192 HSP 2 Score: 25.7942 bits (55), Expect = 3.773e-60 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 722 KKSQILHRYPS 754 +KSQILHRYPS Sbjct: 192 RKSQILHRYPS 202
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_ORYSJ (Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMC PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 6.265e-54 Identity = 109/148 (73.65%), Postives = 123/148 (83.11%), Query Frame = 3 Query: 294 VRASAAVET----KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 VRA+ AV+ KV++IRIGTRGSPLALAQAHETR+KL A H ELA+EGA++IVIIKTTGD IL +PLADIGGKGLFTKEID+AL+ +IDIAVHSMKDVPTYLPE TILPCNL REDVRDAFI PAGS+VG+ASLRR Sbjct: 33 VRAAVAVQAEAQAKVSLIRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVGSASLRR 180 HSP 2 Score: 20.7866 bits (42), Expect = 6.265e-54 Identity = 7/11 (63.64%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 722 KKSQILHRYPS 754 ++SQIL++YPS Sbjct: 180 RQSQILYKYPS 190
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_PARDP (Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd 1222) GN=hemC PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37 Identity = 79/131 (60.31%), Postives = 100/131 (76.34%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IRIGTRGS LALAQAHETR++LMA H A A +IV+IKTTGD++L +PL +IGGKGLFT+EI++AL+ +IDIAVHSMKD+PT PE ++ C L REDVRDAF+ P G++VG++SLRR Sbjct: 11 IRIGTRGSALALAQAHETRDRLMAAHGLAAD--AFRIVVIKTTGDRVLDRPLKEIGGKGLFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELPQGAVVGSSSLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NITWN (Porphobilinogen deaminase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=hemC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.054e-33 Identity = 79/129 (61.24%), Postives = 92/129 (71.32%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IGTRGSPLALAQAHE R++L H ++A E I I I+T+GD I +PL D+GGKGLFTKEI+EAL+ ID AVHS KDVPT+LP+ T LP L REDVRD FI PAG+ VGTASLRR Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAH-QVAPE-RIAIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATVGTASLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_NITHX (Porphobilinogen deaminase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hemC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33 Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 3 Query: 339 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 IGTRGS LALAQA+E R++L H ++A E I I I+T+GD I +PL D+GGKGLFTKEI+EAL+ ID AVHS KDVPT+LP+ T LP L REDVRDAFI PAGSIVGTASLRR Sbjct: 13 IGTRGSALALAQANEVRDRLARAH-QVAPE-RIVIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIVGTASLRR 139
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_AGRT5 (Porphobilinogen deaminase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hemC PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.289e-31 Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 RIGTRGSPLALAQA+ETR++LMA H E +IV++ T GD+I + L++IGGKGLFT+E++ L++ ++DIAVHS KD+PT LPE L L RED+RDAFI P G++VG+ASLRR Sbjct: 7 RIGTRGSPLALAQAYETRSRLMAAHG--LPEEMFEIVVLSTKGDRITDRALSEIGGKGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLELPQGAVVGSASLRR 134
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_RHILO (Porphobilinogen deaminase OS=Rhizobium loti GN=hemC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31 Identity = 72/131 (54.96%), Postives = 93/131 (70.99%), Query Frame = 3 Query: 333 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 ++IGTRGSPLALAQAHET+ +LMA H A+ A ++V+I T+GD+I +PL++ GGKGLFTKEI+EAL+ IDIAVHS KD+PT LP+ L L RED RDAF+ G+ VG++SLRR Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGLPAE--AFEVVVISTSGDRIQDRPLSEAGGKGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLLRGAKVGSSSLRR 133
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_RHIME (Porphobilinogen deaminase OS=Rhizobium meliloti GN=hemC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.431e-30 Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 3 Query: 336 RIGTRGSPLALAQAHETRNKLMALH---PELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 RIGTRGSPLA+AQ HETR++L A H PE+ +IVI+ T GD+I + LA+IGGKGLFT+E+++ L++ +D AVHS KD+PT LPE L L RED+RDAF+ P G+ VG++SLRR Sbjct: 7 RIGTRGSPLAMAQTHETRDRLAAAHGLPPEM-----FEIVILSTKGDRITDRSLAEIGGKGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVGSSSLRR 134
BLAST of FC869225 vs. ExPASy Swiss-Prot
Match: HEM3_OCHA4 (Porphobilinogen deaminase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hemC PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29 Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 321 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRR 725 K ++IGTRGS LALAQA+ETR +LM H E AI+I+ + T GD+I + L++IGGKGLFT+EI++AL + +ID+AVHS KD+PT LP+ L L+RED RDAFI P G+ VG++SLRR Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHG--LPEEAIEIIPMSTAGDRIQDRALSEIGGKGLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGATVGSSSLRR 139 The following BLAST results are available for this feature:
BLAST of FC869225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869225 ID=FC869225; Name=FC869225; organism=Citrus clementina; type=EST; length=756bpback to top |