FC869235

Overview
NameFC869235
Unique NameFC869235
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15306 contig Ccv1_Contig15306:265..980. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3H1_ARATH (Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.266e-94
Identity = 167/238 (70.17%), Postives = 203/238 (85.29%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            +IV AL  DL KPELESS+YEV+LL+ SIK ALK+LK+WM PEKAKTS+TTFP+SAEIV EP GVVL+IS WNYPFLLS+DPV+GAI+AGNA+VLKPSE+APASS+LL KL+ +Y+D S++RVVEGAV ETSALL+QKWDKI YTG+S++ R++MAAAAKHLTPV+LELGGKSPVV DS  +LKV  RR+I+GKWGCNNGQAC+SPD+I+TTK++AP            FYGK  +ES
Sbjct:   51 EIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIES 288          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3I1_ARATH (Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 1.188e-84
Identity = 152/237 (64.14%), Postives = 191/237 (80.59%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            I +AL QDL KPELE+ + E++  K+S   A+KELK+WM PE  KTS+TTFPSSA+IV EP GVVL+IS WN+PFLLS++PV+GAIAAGNA+VLKPSE+APA+SSLLAKL  EY+D ++IRV+EG V ET+ALLDQKWDKI +TG +RVARI+MAAAA++LTPV+LELGGK P + DS +NL+VA RR+I GKW CN+GQACI  D++ITTKDFA             F+G+ +LES
Sbjct:  115 ITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSEPLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTIRVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDVNLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALES 351          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: ALDH_CRAPL (Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.100e-81
Identity = 146/238 (61.34%), Postives = 188/238 (78.99%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            ++V+AL  DL KPE E+ ++E+ ++  + KSALKEL  WM P+K KTS+ T+PSSAEIV EP GVVL+I+ WNYPFLL+LDP++GAIAAGN +VLKPSE+APA+S+LLAKL+ +Y+D S+IRVVEGAV E  ALLDQ+WDKI YTG+S+V +IV+++AAKHLTPV+LELGGK P V D+ I+LKVA RR+I  KW  N+GQ CISPD+IITT++ AP            FYGK  L+S
Sbjct:   45 EVVEALRADLKKPEHEAYVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWNYPFLLALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQALLDQRWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISWKWSGNSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKS 282          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3F1_ARATH (Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53
Identity = 102/240 (42.50%), Postives = 151/240 (62.92%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS---GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            I +AL QDL K   E+   E+ ++  +   A+  L  W  P+ +K  +  +P+  +++ EP+G VL++S WN+P  LSLDP++GAIAAGN ++LK SE++P +S+ LAK +  Y+D  +I+V+EG     + LL  +WDKI +TG+ ++ RI+MAAAA+HLTPV LELGGK P + D      N+K   +R+  GKWG  NGQACIS D+++  K FAP            F+G+   ES
Sbjct:   48 ICNALFQDLGKHSTEAFRDELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKES 287          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A2_MACFA (Fatty aldehyde dehydrogenase OS=Macaca fascicularis GN=ALDH3A2 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.261e-51
Identity = 106/238 (44.54%), Postives = 146/238 (61.34%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            DI+ A+  DL K EL +   EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L + P++GAIAAGNA+++KPSE++  ++ ++AKL+ +Y+D     V+ G V ET+ LL Q++D I YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ CI+PD+I+                   FYG+   ES
Sbjct:   40 DILAAIAADLCKSELNAYSQEVITVLGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQPLGVVLIIGAWNYPFVLIIQPLIGAIAAGNAVIIKPSELSENTAKIVAKLLPQYLDQDLYVVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIAPDYILCEASLQSQIVWKIKETVKEFYGENIKES 276          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A2_HUMAN (Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.953e-51
Identity = 106/238 (44.54%), Postives = 145/238 (60.92%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            DI+ A+  DL K E      EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L++ P++GAIAAGNA+++KPSE++  ++ +LAKL+ +Y+D     V+ G V ET+ LL Q++D I YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ CI+PD+I+                   FYG+   ES
Sbjct:   40 DILTAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKES 276          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A2_PONAB (Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.856e-51
Identity = 106/238 (44.54%), Postives = 145/238 (60.92%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            DI+ A+  DL K E      EV  +   I   L+ L  W+T +  K ++ T    A I P+P GVVLII  WNYPF+L++ P++GAIAAGNA+++KPSE++  ++ +LAKL+ +Y+D     V+ G V ET+ LL Q++D I YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L + CRR+  GK+  N GQ CI+PD+I+                   FYG+   ES
Sbjct:   40 DILAAIAADLCKSEFNVYSQEVITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIGAIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKY-MNCGQTCIAPDYILCEASLQNQIVWKIKETVKEFYGENIKES 276          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A2_RAT (Fatty aldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh3a2 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.500e-50
Identity = 107/233 (45.92%), Postives = 143/233 (61.37%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGK 700
            DI+ A+  DL K EL +  +EV  +   I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF+L+L P+VGAIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G V ET+ LL Q++D I YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+                   FYG+
Sbjct:   40 DILAAIAADLSKSELNAYSHEVITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKY-MNCGQTCIAPDYILCEASSQDQIVQKIKDTVKDFYGE 271          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A2_MOUSE (Fatty aldehyde dehydrogenase OS=Mus musculus GN=Aldh3a2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.499e-50
Identity = 104/233 (44.64%), Postives = 143/233 (61.37%), Query Frame = 2
Query:    2 DIVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGK 700
            +I+ A+  DL K EL +  +EV  +   I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF+L++ P+VGAIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G + ET+ LL Q++D I YTGN+ V +IVM AAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N GQ CI+PD+I+                   FYG+
Sbjct:   40 EILAAIAADLSKSELNAYSHEVITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTMQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYAIVNGGIPETTELLKQRFDHILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRVAWGKY-MNCGQTCIAPDYILCEASLQNQIVQKIKETVKDFYGE 271          
BLAST of FC869235 vs. ExPASy Swiss-Prot
Match: AL3A1_RAT (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 9.499e-50
Identity = 108/237 (45.57%), Postives = 144/237 (60.76%), Query Frame = 2
Query:    5 IVDALLQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDFAPXXXXXXXXXXXXFYGKKSLES 715
            I  AL  DL K E  S   EVA +   + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF L++ P+VGA+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +++D I YTG++ V +IVMAAAAKHLTPV LELGGKSP   D   +L VACRR+  GK+  N+GQ C++PD+I+                   FYG+ + +S
Sbjct:   44 ISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQS 279          
The following BLAST results are available for this feature:
BLAST of FC869235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
AL3H1_ARATH1.266e-9470.17Aldehyde dehydrogenase family 3 member H1 OS=Arabi... [more]
AL3I1_ARATH1.188e-8464.14Aldehyde dehydrogenase family 3 member I1, chlorop... [more]
ALDH_CRAPL6.100e-8161.34Aldehyde dehydrogenase OS=Craterostigma plantagine... [more]
AL3F1_ARATH5.381e-5342.50Aldehyde dehydrogenase family 3 member F1 OS=Arabi... [more]
AL3A2_MACFA2.261e-5144.54Fatty aldehyde dehydrogenase OS=Macaca fasciculari... [more]
AL3A2_HUMAN2.953e-5144.54Fatty aldehyde dehydrogenase OS=Homo sapiens GN=AL... [more]
AL3A2_PONAB3.856e-5144.54Fatty aldehyde dehydrogenase OS=Pongo abelii GN=AL... [more]
AL3A2_RAT2.500e-5045.92Fatty aldehyde dehydrogenase OS=Rattus norvegicus ... [more]
AL3A2_MOUSE9.499e-5044.64Fatty aldehyde dehydrogenase OS=Mus musculus GN=Al... [more]
AL3A1_RAT9.499e-5045.57Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]

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Properties
Property NameValue
Genbank descriptionC31010A04EF AbioticL1 Citrus clementina cDNA clone C31010A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869235 ID=FC869235; Name=FC869235; organism=Citrus clementina; type=EST; length=716bp
GGACATCGTCGACGCTCTTCTCCAAGATCTCGATAAGCCGGAACTTGAAT
CCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTATCAAGTCAGCACTC
AAGGAACTAAAACACTGGATGACACCAGAGAAGGCTAAAACTTCAATTAC
AACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACCATTTGGTGTTGTAT
TAATCATCTCACCATGGAATTATCCTTTCTTGTTGTCTCTCGATCCAGTT
GTTGGGGCTATTGCAGCTGGTAACGCTCTGGTTCTAAAGCCATCTGAAGT
TGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGTTGGTGAATATATGG
ATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTGCTGAAACGTCTGCA
CTGCTTGATCAAAAGTGGGATAAAATATGTTATACAGGCAATTCAAGAGT
TGCACGCATTGTGATGGCTGCAGCTGCAAAGCATCTAACACCAGTTCTTT
TGGAGCTTGGAGGAAAATCTCCAGTTGTCTTTGATTCGGGCATCAATTTA
AAAGTTGCCTGTAGGCGGATGATTATGGGCAAGTGGGGTTGTAATAATGG
ACAAGCATGCATTTCTCCTGATCACATTATAACGACCAAAGATTTTGCTC
CNAAGCTGCTAGAGTCTCTGAAAAATGAATTGGAGAATTTTTACGGGAAG
AAATCATTGGAATCAA
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