FC869257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869257 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 1.883e-91 Identity = 158/169 (93.49%), Postives = 165/169 (97.63%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 509 YAIAFQER++IPDEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVL Sbjct: 229 YAIAFQERIRIPDEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVL 397
BLAST of FC869257 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 1.650e-87 Identity = 152/169 (89.94%), Postives = 157/169 (92.90%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 509 YAIAFQER+KI D+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+L Sbjct: 226 YAIAFQERIKISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDIL 394
BLAST of FC869257 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 4.205e-83 Identity = 144/169 (85.21%), Postives = 156/169 (92.31%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 509 YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKVLDVL Sbjct: 225 YAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKVLDVL 393
BLAST of FC869257 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 4.372e-64 Identity = 117/170 (68.82%), Postives = 137/170 (80.59%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 509 YAIAFQER+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS RMCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+L Sbjct: 175 YAIAFQERIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDIL 344
BLAST of FC869257 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15 Identity = 57/167 (34.13%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 12 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVL 509 A+ E +K P Y ++Y +SPDFYGWVFP ++G G T D+ T R + + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR AEA + ++G DL+ + K + +KVL ++ Sbjct: 167 AYHEIIKAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLRQMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEAAMAFLKSG----KPADLKLARAGFMKEHGTVFKVLRMM 327 The following BLAST results are available for this feature:
BLAST of FC869257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869257 ID=FC869257; Name=FC869257; organism=Citrus clementina; type=EST; length=509bpback to top |