FC869260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 1.839e-101 Identity = 179/213 (84.04%), Postives = 191/213 (89.67%), Query Frame = 2 Query: 80 ARNGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQHSF 718 A G+V VDPKP NG +SKVID +EKL+VK++YDSS P HYL+GNF PV ETPPTKDL V GHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFV TSRLKQEE+FG +KFMKIGDLKGLFGLLMVN+ MLR KLKVLD+SYG GT NTALVYHHGKLLALSEADKPYA+KV EDGDL TLGMLDYDKRL HSF Sbjct: 10 AEGGLVKVDPKPTNGFSSKVIDLLEKLLVKFLYDSSLPHHYLTGNFGPVT-ETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSF 221
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.401e-101 Identity = 179/221 (81.00%), Postives = 194/221 (87.78%), Query Frame = 2 Query: 56 EKLENDVVARNGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQHSF 718 EK EN V I+ V+PKP NG TSK +D +EK+IVK YDSS P H+LSGNFAPV DETPP KDL V GHLPDCLNGEFVRVGPNPKF+PVAGYHWFDGDGMIHGLRIKDGKA+YVSRFV+TSR KQEE+F G+KFMKIGDLKGLFGLLMVNMQMLRAKLK+LDVSYG+GTANTALVYHH KLLALSE DKPYA+KV EDGDL TLGMLDYDKRL H+F Sbjct: 4 EKKENGV-----ILEVEPKPSNGFTSKAVDLLEKIIVKLFYDSSLPHHWLSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNF 219
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2) HSP 1 Score: 351.288 bits (900), Expect = 3.038e-96 Identity = 164/211 (77.73%), Postives = 187/211 (88.63%), Query Frame = 2 Query: 86 NGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQHSF 718 + I++V P+P G +SK++D +E+L+VK M+D+S PLHYLSGNFAP+ DETPP KDL V G LP+CLNGEFVRVGPNPKF VAGYHWFDGDGMIHG+RIKDGKATYVSR+V+TSRLKQEEFFG AKFMKIGDLKG FGLLMVN+Q LR KLK+LD +YGNGTANTALVYHHGKLLAL EADKPY +KVLEDGDL TLG++DYDKRL HSF Sbjct: 9 SSIISVHPRPSKGFSSKLLDLLERLVVKLMHDASLPLHYLSGNFAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMIHGVRIKDGKATYVSRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSF 219
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 3.967e-96 Identity = 166/221 (75.11%), Postives = 185/221 (83.71%), Query Frame = 2 Query: 56 EKLENDVVARNGIVAVDPKPKNGVTSKVIDFVEKLIVKWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQHSF 718 E + +V R IVAV+P+P G+ S +D +EK +V +D S+P HYLSGNFAPV DETPP DL V GHLP+CLNGEFVRVGPNPKF PVAGYHWFDGDGMIHG+RIKDGKATY SR+V+TSRLKQEE+F G KFMKIGDLKG FGL MV MQ+LRAKLKV+DVSYG GT NTAL+YHHGKLLALSEADKPY VKVLEDGDL TLG+LDYDKRL HSF Sbjct: 3 EVAKEEVEERRSIVAVNPQPSKGLVSSAVDLIEKAVVYLFHDKSKPCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLALSEADKPYVVKVLEDGDLQTLGLLDYDKRLSHSF 223
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 85/204 (41.67%), Postives = 123/204 (60.29%), Query Frame = 2 Query: 113 PKNGVTSKVIDFVEKLIV-----KWMYDSSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRL 706 P S +DF E ++ K + + P H +SGN+APVP+++ + L V G +PDC++G ++R G NP F PV+G+H FDGDGM+H ++I +G A+Y RF T RL QE+ G F K IG+L G G+ + + R +L+ G G AN LVY H +LLA+SE D PY V+V ++GDL T+G D+D +L Sbjct: 78 PLQRAASAALDFAETALLRRERSKPLPKTVDPRHQISGNYAPVPEQSVKSS-LSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQL 280
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.098e-37 Identity = 84/177 (47.46%), Postives = 114/177 (64.41%), Query Frame = 2 Query: 182 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKA-TYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRL 706 ++ P ++GNFAPV E PP +L V G +P ++G + R G NP F PVAG+H FDGDGM+H LRI++G A +Y RF T+RL+QE G F K IG+L G G+ + + RA ++D S G G AN LVY +G+LLA+SE D PY V+V +DGDL T+G D+D +L Sbjct: 116 TADPAVQIAGNFAPV-GERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQL 291
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 77/177 (43.50%), Postives = 114/177 (64.41%), Query Frame = 2 Query: 182 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQ 709 ++ P ++GNFAPV +E P ++L V+G LPD + G +VR G NP PV G+H+FDGDGM+H ++ + G A+Y RF +T+R QE G F K IG+L G G+ + + RA ++D ++G G AN LVY +G+LLA+SE D PY V++ +GDL T+G D+D +L+ Sbjct: 116 TADPSVQIAGNFAPV-NEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLE 291
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36 Identity = 81/197 (41.12%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 140 IDFVEKLIVKWMYDSSQPLH-------YLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRL 706 +D VE +V ++S PL ++GNFAPVP+ + L V+G +P C++G +VR G NP + PVAG+H+FDGDGM+H ++ +G A+Y RF T RL QE+ G F K IG+L G G+ + + R+ +++D S+G G AN LVY + LLA+SE D PY V++ +GDL T+G D++ +L Sbjct: 116 LDMVETALVS--HESKHPLPKTADPKVQIAGNFAPVPEHAAD-QALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNGDLTTVGRYDFNGQL 309
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.028e-35 Identity = 79/196 (40.31%), Postives = 120/196 (61.22%), Query Frame = 2 Query: 140 IDFVEKLIVKWMYDS-----SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQ 709 ID E+ ++ DS + P ++GN++PVP E+ ++L V G +PDC++G ++R G NP F P AG+H FDGDGM+H ++I +G A+Y RF +T RL QE+ G F K IG+L G G+ + + R +++ G G AN LVY + +LLA+SE D PY +K+ + GDL T+G D+D +L+ Sbjct: 80 IDAAERALISHEQDSPLPKTADPRVQIAGNYSPVP-ESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDLPYQLKITQTGDLQTVGRYDFDGQLK 274
BLAST of FC869260 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35 Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 2 Query: 125 VTSKVIDFVEKLIVKWMYDS------SQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIK-DGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYHHGKLLALSEADKPYAVKVLEDGDLXTLGMLDYDKRLQHS 715 + + ++D +E IV M + + P LSGNFAPV +E P L V+G +P CL G ++R G NP F P+AG+H FDGDGMIH + I D + +Y R+ +T+RL QE G + F K IG+L G GL + + RA + ++D + G G AN +V+ +G+LLA+SE D PY VK+ GDL T+G +D ++ S Sbjct: 69 LAATMLDKIESSIVIPMEQNRPLPKPTDPAVQLSGNFAPV-NECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSS 272 The following BLAST results are available for this feature:
BLAST of FC869260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869260 ID=FC869260; Name=FC869260; organism=Citrus clementina; type=EST; length=720bpback to top |