FC869284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.789e-55 Identity = 117/167 (70.06%), Postives = 129/167 (77.25%), Query Frame = 1 Query: 247 QSQLGQQ-IRVACKPNRNERNLQQSRRGVVRCEVAVDPSSAS------ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCCITR-CSQHLFE 723 Q+ LG +RV K NR R L Q RCE++ SAS ALEQLK SA DRYTKERSSIVVIGLS+HTAPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYV+ALSQHRGVKEVTEWMSKTSGIPV+E+C+H F + +QH+FE Sbjct: 34 QTPLGLNGVRVLPKNNRTRRGLIQK----ARCELSASSDSASNAASISALEQLKNSAADRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDATQHIFE 196
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.060e-54 Identity = 113/155 (72.90%), Postives = 125/155 (80.65%), Query Frame = 1 Query: 268 IRVACKPNRNERNLQQSRRGVVRCEVAVDPSSAS--ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCCITR-CSQHLFE 723 IR NRN+R L Q RCE++ +AS ALEQLK SA DRYTKERSSIVVIGLS+HTAPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYV+ALSQHRGVKEVTEWMSKTSGIPV+E+C+H F + +QH+FE Sbjct: 37 IRALPMNNRNKRGLIQR----ARCEISPSNKAASISALEQLKTSAIDRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDVTQHIFE 187
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.869e-54 Identity = 117/167 (70.06%), Postives = 127/167 (76.05%), Query Frame = 1 Query: 280 CKPNRNERNLQQSRRGV-----VRCEVA----------VDP---SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCCITR-CSQHLFE 723 CK R R L Q R GV +CE+A +DP S+ SALEQLK SA DRYTKERSSIVVIGLS+HT PVEMREKLAIPEAEWPRAIGELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPV+E+C+H F +QH+FE Sbjct: 38 CKSIRTRRILFQ-RTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFE 203
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.812e-46 Identity = 94/120 (78.33%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 367 SALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCCI-TRCSQHLFE 723 SALE LK S+ +RYTKER SIVVIGL+VHTAPVE+REKLAIPEA+WP IGELC LNHIEEAAVLSTCNR+EIYVVALSQHRGVKEVTEWMSK SGIP++ELC+H T +QHLFE Sbjct: 76 SALELLKTSSVNRYTKERISIVVIGLNVHTAPVELREKLAIPEAQWPPGIGELCALNHIEEAAVLSTCNRIEIYVVALSQHRGVKEVTEWMSKRSGIPISELCKHRVLLYNTDATQHLFE 195
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.708e-42 Identity = 95/142 (66.90%), Postives = 108/142 (76.06%), Query Frame = 1 Query: 319 RRGVVRCEVAVDPSSAS------ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCC-ITRCSQHLFE 723 R GVVRC+ D +AS ALEQ K SA DRY KE+SSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F + ++HLFE Sbjct: 37 RSGVVRCDAGGDAQAASKAASITALEQFKISA-DRYMKEKSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFE 177
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.106e-41 Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 328 VVRCEVAVDP----------SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCC-ITRCSQHLFE 723 VVRC+ V+ +S +ALEQ K SA DRY KERSSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F + ++HLFE Sbjct: 46 VVRCDAGVEAQAQAQAVAKAASVAALEQFKISA-DRYMKERSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFE 187
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 5.106e-41 Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = 1 Query: 328 VVRCEVAVDP----------SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCC-ITRCSQHLFE 723 VVRC+ V+ +S +ALEQ K SA DRY KERSSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F + ++HLFE Sbjct: 46 VVRCDAGVEAQAQAQAVAKAASVAALEQFKISA-DRYMKERSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFE 187
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.391e-38 Identity = 87/141 (61.70%), Postives = 104/141 (73.76%), Query Frame = 1 Query: 328 VVRCE--------VAVDPSSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCC-ITRCSQHLFE 723 VVRC+ +A +S +ALEQ K SA DRY KE+SSI VIGLS+HTAPVEMREKLA+ E WPRA+ EL NLNHIE+AAVLS CNRMEIYVVALS +RG++E+ +WMS SGIP EL EH F + ++HLFE Sbjct: 44 VVRCDAGPGVPAQMAAMAASVAALEQFKISA-DRYMKEKSSIAVIGLSIHTAPVEMREKLAVAEELWPRAVAELTNLNHIEKAAVLSPCNRMEIYVVALSWNRGIREIVDWMSMKSGIPAVELREHLFMFRDSDATRHLFE 183
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.425e-37 Identity = 82/116 (70.69%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 379 QLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGFCC-ITRCSQHLFE 723 Q K SA DRY KE+SSI VIGLSVHTAPV+MREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F + ++HLFE Sbjct: 1 QFKISA-DRYIKEKSSIAVIGLSVHTAPVDMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSGATRHLFE 115
BLAST of FC869284 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP4 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.107e-19 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 424 SIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHGF 687 +I V+GLS TAPVE+REKL++PE AI +LC+ HIEE A+LSTCNR+EIY+V G++EVT+++S+ S +P+ EL +H F Sbjct: 2 NIAVVGLSHKTAPVEVREKLSVPEDGLEGAIAQLCSYPHIEEVAILSTCNRLEIYIVTSETESGIREVTQFLSEWSHLPLRELRQHLF 89 The following BLAST results are available for this feature:
BLAST of FC869284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869284 ID=FC869284; Name=FC869284; organism=Citrus clementina; type=EST; length=746bpback to top |