FC869285

Overview
NameFC869285
Unique NameFC869285
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length614
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869285 vs. ExPASy Swiss-Prot
Match: DFRA_SYNY3 (Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803) GN=dfrA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  146 VSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISGLPSEGAVELVYGDVTDYRSLVDACFGCRVIFHTAALVEPWLPDPSRFF-ANV-----VQAARETKTVEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG 592
            V+G +G++G  L   LL+QG+ VRALVR   R  ++  LP    ++ V GD+ D   L     GC+ +FH AA    W  D    + +NV     + A  +   +E+ +YTSS  A+G   DG  ADE+     +     Y++SK  A++ AL AA +G
Sbjct:   15 VTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNLQNLP----IDWVVGDLND-GDLHQQMQGCQGLFHVAAHYSLWQKDREALYRSNVLGTRNILACAQKAGIERTVYTSSVAAIGVKGDGQRADESYQSPVEKLIGAYKQSKYWAEQEALTAAQQG 168          
The following BLAST results are available for this feature:
BLAST of FC869285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DFRA_SYNY35.320e-1334.59Putative dihydroflavonol-4-reductase OS=Synechocys... [more]
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Properties
Property NameValue
Genbank descriptionC31010E10EF AbioticL1 Citrus clementina cDNA clone C31010E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869285 ID=FC869285; Name=FC869285; organism=Citrus clementina; type=EST; length=614bp
CTGCGCATGGATGGATAATATAGAAATTCCCAACAAAATATGCCATCATT
CATATTGTATTGTAATTTCTAATTGTGTTGACATTTTGTTTTAGCCGATT
GATTCGACTTTGTGTTTGGGAGAGGGAGAAAGTATGAAGATACTAGTGAG
CGGCGCGTCGGGTTACTTAGGGGGGAGACTCTGCCACGCGCTTCTGAAGC
AAGGCCACTCGGTTCGAGCCTTGGTCAGGCGCACCAGCGACATCTCCGGT
CTCCCTTCGGAGGGAGCTGTCGAGCTGGTCTACGGCGATGTGACCGACTA
CCGCTCGCTCGTCGACGCCTGCTTCGGTTGCCGCGTCATCTTCCACACAG
CCGCTCTTGTCGAGCCTTGGCTCCCCGATCCTTCTAGGTTCTTTGCCAAC
GTAGTGCAGGCAGCTAGAGAGACTAAAACAGTCGAGAAGATTATTTACAC
GTCTTCATTCTTTGCTCTTGGTTCAACAGATGGATACATTGCCGATGAAA
ATCAAGTTCATGAGGAGAAGTATTTCTGTACCCAGTACGAGAGGTCTAAG
GCTGTGGCTGATAAGATAGCTCTACAAGCTGCGTCAGAGGGGTTACCATA
GTGCCAGTTTACCC
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