FC869288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869288 vs. ExPASy Swiss-Prot
Match: COG8_HUMAN (Conserved oligomeric Golgi complex subunit 8 OS=Homo sapiens GN=COG8 PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 3 Query: 3 LANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVXXXXXXXXXXXXXXXRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADD------TSGSEENYDGGLLFSWAMHQITAHLKTLKVMLPKITEGVSLSNILDQCMYCAMXXXXXXXDFRG 647 L H+ +L++LEIPQLMDTCVRN Y+EAL+L AYV +L + +P+IQ + EV R+NIQLP CLR+IGYLRR+ VF+E E+R++FL+ R+AWL IL + + Y ++ I R+HLFD++ QYRAIF+D+ G + + W + +++ L+ L+ L + G L ++L QCMY + DFRG Sbjct: 146 LNRHTEILEILEIPQLMDTCVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQLRTNIQLPACLRVIGYLRRMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFHITKTIEASRVHLFDIITQYRAIFSDEDPLLPPAMGEHTVNESAIFHGWVLQKVSQFLQVLETDLYRGIGG-HLDSLLGQCMYFGLSFSRVGADFRG 365
BLAST of FC869288 vs. ExPASy Swiss-Prot
Match: COG8_MOUSE (Conserved oligomeric Golgi complex subunit 8 OS=Mus musculus GN=Cog8 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.794e-41 Identity = 89/221 (40.27%), Postives = 130/221 (58.82%), Query Frame = 3 Query: 3 LANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVXXXXXXXXXXXXXXXRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADD------TSGSEENYDGGLLFSWAMHQITAHLKTLKVMLPKITEGVSLSNILDQCMYCAMXXXXXXXDFRG 647 L H+ +L++LEIPQLMDTCVRN ++EAL+L AYV +L + +P+IQ + EV R+NIQLP CLR+IGYLRR+ VF+E E+R++FL+ R+AWL IL + + Y ++ I R+HLFD++ QYRAIF+D+ G +G + W + +I+ L+ L+ L + G L ++L QCMY + DFRG Sbjct: 152 LNRHTEILEILEIPQLMDTCVRNSYHEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQLRTNIQLPACLRVIGYLRRMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFHITKTIEACRVHLFDIITQYRAIFSDEDPLLPPAMGEYTVNEGAIFHGWVLQKISQFLQVLETDLYRGIGG-RLDSLLGQCMYFGLSFSRVGADFRG 371
BLAST of FC869288 vs. ExPASy Swiss-Prot
Match: COG8_BOVIN (Conserved oligomeric Golgi complex subunit 8 OS=Bos taurus GN=COG8 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.519e-40 Identity = 86/221 (38.91%), Postives = 129/221 (58.37%), Query Frame = 3 Query: 3 LANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVXXXXXXXXXXXXXXXRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADD------TSGSEENYDGGLLFSWAMHQITAHLKTLKVMLPKITEGVSLSNILDQCMYCAMXXXXXXXDFRG 647 L H+ +L++LEIPQLMDTCVRN Y+EAL+L AYV +L + +P+IQ + EV R+NIQLP CLR+IG+LR++ VF+E E+R++FL+ R+AWL IL + + Y ++ I R+HLFD++ QYRAIF+D+ G + + W + +++ L+ L+ L + G L ++L QCMY + DFRG Sbjct: 152 LNRHTEILEILEIPQLMDTCVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQLRTNIQLPACLRVIGFLRQMDVFTEAELRVKFLQARDAWLRSILTAIPNDDPYFHITKTIEACRVHLFDIITQYRAIFSDEDPLLPPAMGEHMVNESAIFHGWVLQKVSQFLQVLETDLNR-GIGSRLDSLLGQCMYFGLSFSRVGADFRG 371
BLAST of FC869288 vs. ExPASy Swiss-Prot
Match: COG8_DICDI (Conserved oligomeric Golgi complex subunit 8 OS=Dictyostelium discoideum GN=cog8 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.626e-34 Identity = 77/217 (35.48%), Postives = 121/217 (55.76%), Query Frame = 3 Query: 3 LANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVXXXXXXXXXXXXXXXRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILE-DLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADDTSGSEENYDGGLLFSWAMHQITAHLKTLKVMLPKITEGVSLSNILDQCMYCAMXXXXXXXDFRGL 650 L N STLLD+LEIPQLMDTC++N ++DEAL LE++ K+ + +I + E+ R +I L C++ IGYLRR+ ++ E E+++ FL R+ WL L+ D+ N YL + + R ++FD+V QY AIF+++ S E+ D +L++W +I ++ + L I G S+S +L+ MY +M DFR L Sbjct: 77 LDNFSTLLDILEIPQLMDTCIKNNSFDEALQLESFAKKIYKQYSNNTVIIEIIKEIKVCTRSLISTLQQQLRQDITLTNCIKTIGYLRRLSIYKENELKIIFLHSRDQWLINSLKFDITNSNHVTYLTKLTDSCRTNIFDIVTQYNAIFSNE-SNDEDQLDDLILYNWIQQKIKVYINIVDSTLNHIKSGSSISYVLENSMYFSMSISRVGIDFRNL 292
BLAST of FC869288 vs. ExPASy Swiss-Prot
Match: COG8_DROME (Conserved oligomeric Golgi complex subunit 8 OS=Drosophila melanogaster GN=CG6488 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.054e-33 Identity = 81/227 (35.68%), Postives = 129/227 (56.83%), Query Frame = 3 Query: 3 LANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVCKLSTLHPKLPIIQALAAEVXXXXXXXXXXXXXXXRSNIQLPECLRIIGYLRRIGVFSEYEMRLQFLRCREAWLTGILEDLDQKNAYEYLKGMINCHRMHLFDVVNQYRAIFADD-----TSGSEENYDG------GLLFSWAMHQITAHLKTLKVMLPKITEGVSLSNILDQCMYCAMXXXXXXXDFRGL 650 L ++ LL++LE+PQLM+ C+R G Y+EAL+L AY +L +P++ ++ V R+++QLP+CL+I+GYLRR+ F + E+RL+FL+ R+AWLT LE + +A ++L I R++LF+++ QYRAIF +D T S G L +W ++I+ L+TL+ L ++ G S+ +L QCMY + DFR L Sbjct: 133 LQKNAQLLEVLELPQLMERCIREGRYEEALELAAYATRLGQHQGHIPVVTSIVRSVEALWHNMLVQLVAQLRTDLQLPKCLQIVGYLRRMQAFGDNELRLKFLQARDAWLTSCLEAIPTADAQQHLSKTIEITRINLFNIITQYRAIFPEDEGTLKTQSSLRPLQGVSCNGDRLFQAWLHNKISDFLQTLERDL-QLGVG-SVETVLGQCMYFGLSFSRVGADFRAL 357 The following BLAST results are available for this feature:
BLAST of FC869288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869288 ID=FC869288; Name=FC869288; organism=Citrus clementina; type=EST; length=650bpback to top |