FC869292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYE_IPONI (Phytochrome E OS=Ipomoea nil GN=PHYE PE=2 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 1.895e-96 Identity = 168/242 (69.42%), Postives = 201/242 (83.06%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVL 727 VRL+ETAT PIFGVDSSG INGWNAK+AELTGL A+ A+GK LID+V HE+S + L+CRAL G+ED+NVE+KL KF VVY++VNACTSRDYKN++ GVCFVGQDIT EK +MDKF+RLQGDYEAIIQS+NPLIPPIFASDENACCSEWN AME++TG ++ EVIGK LP EIFG CR+KGQD LTKFMILLYQGI+G TE FGFF+R+G F++V +TA++RTD G ++ Sbjct: 603 VRLVETATVPIFGVDSSGLINGWNAKIAELTGLQANVAIGKYLIDDVTHEDSHETFKALMCRALQGEEDRNVEVKLLKFGNHPTKEVVYLVVNACTSRDYKNDIIGVCFVGQDITPEKAVMDKFVRLQGDYEAIIQSLNPLIPPIFASDENACCSEWNAAMERLTGLVKCEVIGKRLPGEIFGGLCRLKGQDALTKFMILLYQGISGHDTEKLSFGFFDRKGNFIDVFITANKRTDERGNII 844
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYE_ARATH (Phytochrome E OS=Arabidopsis thaliana GN=PHYE PE=1 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 5.340e-91 Identity = 165/247 (66.80%), Postives = 201/247 (81.38%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQH----SVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGT-ENFPFGFFNRQGQFVEVTLTASRRTDAXGKVL 727 VR+IETATAPIFGVDSSG INGWN K AE+TGL ASEAMGKSL DE+V EES+ A+E+L+C+AL G+E+K+V LKLRKF Q H S V +LVN+CTSRDY N+ GVCFVGQDIT EK + D+FIRLQGDY+ I+QS+NPLIPPIFASDENACCSEWN AMEK+TGW +HEVIGKMLP E+FG FC++K QD LTKF+I LYQGI G E+ FFN++G+++E +LTA++ T+ GKV+ Sbjct: 600 VRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAALESLLCKALQGEEEKSVMLKLRKFG-QNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQDITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEVIGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTANKSTNIEGKVI 845
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_SOLTU (Phytochrome B OS=Solanum tuberosum GN=PHYB PE=3 SV=2) HSP 1 Score: 330.872 bits (847), Expect = 4.521e-90 Identity = 155/244 (63.52%), Postives = 192/244 (78.69%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETATAPIF VD G INGWNAKVAELTG+ EAMGKSL+ ++V++ESQ E L+ AL G+EDKNVE+KLR F ++ V+++VNAC S+DY NN+ GVCFVGQD+T EKV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN CCSEWNTAMEK+TGW R E++GKML EIFGS CR+KG D +TKFMI+L+ I GQ T+ FPF FF+R G++V+ LTA++R + G + A Sbjct: 626 VRLIETATAPIFAVDVEGRINGWNAKVAELTGVSVEEAMGKSLVHDLVYKESQETAEKLLYNALRGEEDKNVEIKLRTFGAEQLEKAVFVVVNACASKDYTNNIVGVCFVGQDVTGEKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIVGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGDTIGA 869
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_TOBAC (Phytochrome B OS=Nicotiana tabacum GN=PHYB PE=2 SV=2) HSP 1 Score: 328.561 bits (841), Expect = 2.244e-89 Identity = 155/244 (63.52%), Postives = 193/244 (79.10%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETATAPIF VD G INGWNAKVAELT L EAMGKSL+ ++VH+ESQ E L+ AL G+EDKNVE+KLR F ++ V+++VNAC+S+DY NN+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ S NPLIPPIFASDEN CCSEWNTAMEK+TGW R E+IGKML EIFGS CR+KG D +TKFMI+L+ I Q T+ FPF FF+R G++V+ LTA++R + G+++ A Sbjct: 628 VRLIETATAPIFAVDVEGRINGWNAKVAELTDLSVEEAMGKSLVHDLVHKESQETAEKLLFNALRGEEDKNVEIKLRTFGPEQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGVQDTDKFPFSFFDRNGKYVQALLTANKRVNMEGQIIGA 871
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_ARATH (Phytochrome B OS=Arabidopsis thaliana GN=PHYB PE=1 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.526e-88 Identity = 149/244 (61.07%), Postives = 191/244 (78.28%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+ +++++E++ V L+ RAL G E+KNVE+KL+ F + Q V+++VNAC+S+DY NN+ GVCFVGQD+T +K++MDKFI +QGDY+AI+ S NPLIPPIFA+DEN CC EWN AMEK+TGW R EVIGKM+ E+FGS C +KG D LTKFMI+L+ I GQ T+ FPF FF+R G+FV+ LTA++R GKV+ A Sbjct: 657 VRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGA 900
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_SORBI (Phytochrome B OS=Sorghum bicolor GN=PHYB PE=3 SV=2) HSP 1 Score: 323.168 bits (827), Expect = 9.426e-88 Identity = 148/244 (60.66%), Postives = 193/244 (79.10%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETAT PIF VD+ G INGWNAK+AELTGL EAMGKSL+++++ +ES+ VE L+ RAL G+EDKNVE+KL+ F ++ + ++++VNAC+SRDY N+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CSEWNTAMEK+TGW R EV+GK L E+FGSFCR+KG D LTKFM++++ I GQ E FPF FF++ G++V+ LTA+ R+ GK + A Sbjct: 673 VRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSNGAIFVIVNACSSRDYTQNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSRGEVVGKFLIGEVFGSFCRLKGPDALTKFMVVIHNAIGGQDYEKFPFSFFDKNGKYVQALLTANTRSKMDGKSIGA 916
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHY_PINSY (Phytochrome OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 1.608e-87 Identity = 154/241 (63.90%), Postives = 191/241 (79.25%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKV 724 VRLIETATAPI VD +G +NGWNAKVAELTGLP EAMG SL+ ++V E+S VE ++ AL G+E+KNVE+ L+ F QK+ V ++VNAC+SRD+ +N+ GVCFVGQD+T +KV+MDKFIR+QGDY +I+QS NPLIPPIFASDE ACCSEWN AMEKVTGW EVIGKML EIFG CR+KGQD +TKF I+L+Q GQ E FPF FF++QG++VE LTA++RTDA G++ Sbjct: 626 VRLIETATAPILAVDYNGLVNGWNAKVAELTGLPVGEAMGMSLVQDLVFEQSVERVEKMLHNALRGEEEKNVEMMLKTFGPQKEKEAVILVVNACSSRDFTDNIVGVCFVGQDVTSQKVVMDKFIRIQGDYRSIVQSPNPLIPPIFASDEYACCSEWNAAMEKVTGWTHDEVIGKMLVGEIFGGCCRLKGQDAVTKFTIVLHQCNHGQEIEKFPFAFFDKQGKYVEALLTANKRTDADGRI 866
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYD_ARATH (Phytochrome D OS=Arabidopsis thaliana GN=PHYD PE=1 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 6.110e-87 Identity = 148/244 (60.66%), Postives = 191/244 (78.28%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETAT PIF VD G INGWNAK+AELTGL +AMGKSL+ E++++E + V+ L+ AL G E KNVE+KL+ F + Q ++++VNAC+S+DY NN+ GVCFVGQD+T K++MDKFI +QGDY+AII S NPLIPPIFA+DEN CC EWNTAMEK+TGW R EVIGK+L RE+FGS+CR+KG D LTKFMI+L+ I GQ T+ FPF FF+R+G+F++ LT ++R GK++ A Sbjct: 661 VRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGKLLVREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRVSIDGKIIGA 904
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSJ (Phytochrome B OS=Oryza sativa subsp. japonica GN=PHYB PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.110e-87 Identity = 148/244 (60.66%), Postives = 191/244 (78.28%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+ V L+ RAL G EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWNTAMEK+TGW R EV+GK+L E+FG+ CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R+ G+ + A Sbjct: 666 VRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGA 909
BLAST of FC869292 vs. ExPASy Swiss-Prot
Match: PHYB_ORYSI (Phytochrome B OS=Oryza sativa subsp. indica GN=PHYB PE=3 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 6.110e-87 Identity = 148/244 (60.66%), Postives = 191/244 (78.28%), Query Frame = 2 Query: 2 VRLIETATAPIFGVDSSGTINGWNAKVAELTGLPASEAMGKSLIDEVVHEESQGAVENLICRALLGKEDKNVELKLRKFELQKQHSVVYILVNACTSRDYKNNVKGVCFVGQDITHEKVLMDKFIRLQGDYEAIIQSVNPLIPPIFASDENACCSEWNTAMEKVTGWMRHEVIGKMLPREIFGSFCRMKGQDMLTKFMILLYQGITGQGTENFPFGFFNRQGQFVEVTLTASRRTDAXGKVLAA 733 VRLIETAT PIF VD+ G INGWNAKVAELTGL EAMGKSL+++++ +ES+ V L+ RAL G EDKNVE+KL+ F ++ ++++VNAC+SRDY N+ GVCFVGQD+T +KV+MDKFI +QGDY+AI+ + NPLIPPIFASDEN CCSEWNTAMEK+TGW R EV+GK+L E+FG+ CR+KG D LTKFMI+L+ I GQ E FPF FF++ G++V+ LTA+ R+ G+ + A Sbjct: 666 VRLIETATVPIFAVDTDGCINGWNAKVAELTGLSVEEAMGKSLVNDLIFKESEETVNKLLSRALRGDEDKNVEIKLKTFGPEQSKGPIFVIVNACSSRDYTKNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTCCSEWNTAMEKLTGWSRGEVVGKLLVGEVFGNCCRLKGPDALTKFMIVLHNAIGGQDCEKFPFSFFDKNGKYVQALLTANTRSRMDGEAIGA 909 The following BLAST results are available for this feature:
BLAST of FC869292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869292 ID=FC869292; Name=FC869292; organism=Citrus clementina; type=EST; length=743bpback to top |