FC869297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869297 vs. ExPASy Swiss-Prot
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.073e-66 Identity = 119/165 (72.12%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 136 LLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVR-GPSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLED 627 +LR+RSRDGLERV+VDG H+TV++LKT+IQ QL+IP+ +QTLSTN+NLLLAKSPSD L FTDMA+P+ +SSLN++HGS+V+L+Y+GER +R GP+ PAGSFGRKMT++DLIA+QMRV RQE HC+SVSFDRDCA+AFQ +VNE+LAFAVKRGGFMYG V ED Sbjct: 3 MLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSED 167
BLAST of FC869297 vs. ExPASy Swiss-Prot
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.068e-65 Identity = 119/166 (71.69%), Postives = 147/166 (88.55%), Query Frame = 1 Query: 133 MLLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLED 627 M+LRIRSRDGLERVT +GAH+TV++LKT+I QL+IP+ QTLSTN++LLLAK+P+DLL FTD+ +P+ PLSSLN+ HGS+++L+YDGER++ G P PAGSFGRKMT+DDLIA+QMRVTRQE HC+SVSFDRD A+AFQ YVNE+LAFAVKRGGFMYGTV E+ Sbjct: 2 MMLRIRSRDGLERVTAEGAHITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEE 167
BLAST of FC869297 vs. ExPASy Swiss-Prot
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.122e-38 Identity = 90/170 (52.94%), Postives = 117/170 (68.82%), Query Frame = 1 Query: 133 MLLRIRSRDGLERVTV-DGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRGP----SFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLED 627 M+LRIRSRDG +R+TV D A TV +L+ +I +++ +PV Q LS + LLL S S L +A+P PLSSL +S+GS V+LSY + P + + AGSFG+KMTMDDLIA+Q+RVTRQE P C + SFDRD A+AFQ +V E+LAFA KR GF+YG V D Sbjct: 1 MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL----LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDAD 166 The following BLAST results are available for this feature:
BLAST of FC869297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869297 ID=FC869297; Name=FC869297; organism=Citrus clementina; type=EST; length=653bpback to top |