FC869300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.975e-41 Identity = 101/197 (51.27%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 111 MASTVSTQMRLHSPALIFQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKA-PSVKYRRMFCVNSMAKD----VELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 MAS+ S QM +H+ S+ +A + + ++ +++ + SG AL+SR HYAS PI Q S + K++R CV SMA + +E QAKVT KV+FDV+IGG+ AGRIVMGLFG+VVPKT ENFRALCTGEK YGYKG SFHRIIKDFMIQ ISIYG+ FEDE+F LKH G Sbjct: 1 MASSSSMQM-VHT---------SRSIAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYAS--PIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTG 185
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.855e-37 Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 3 Query: 282 LTSRSHYASSFPIVQLSKAPSVKYRRMFCVNSMAKDV-ELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 L+S HYA + Q SKA S+ RR+ C + +V ELQAKVT+K+FFD++IGG+ AGRIV+GLFGD VPKT ENF+ L TG KGYGY+G FHRII +FMIQ +SIYGS FEDESF LKHVG Sbjct: 37 LSSTYHYAPRLSVSQQSKAKSITSRRITCASGAQGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVG 172
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29 Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 3 Query: 201 MLPMTSSITNSQSGHCPASTLK-LSGRALTSRSH------------YASSFPIVQLSKAPSVKY----RRMFCVNSMAKDV-ELQAKVTTKVFFDVDIG---GKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 M ++ +++N +S P L ++ A TS S ++SS P S Y R F V S A+ V E Q+K+T KV+FD+ +G GK AGRIV+GL+GD VP+T ENFRALCTGEKG+GYKG +FHR+I+DFMIQ S+YG +F+DE+F L HVG Sbjct: 1 MATLSMTLSNPKSLSAPPRRLSPINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTKRNHRCFSVQSNAEVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVG 183
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28 Identity = 62/93 (66.67%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 408 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 VT KVFFDV IG K GRIV+GLFG VVPKT ENF AL TGEKGYGYKG FHR+IKDFMIQ ISIYG +F DE+F LKH G Sbjct: 36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYG 128
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28 Identity = 61/93 (65.59%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 408 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 VT KVFFDV IG K GRIV+GLFG VVPKT ENF AL TGEKGYGYKG FHR+IKDFMIQ +SIYG +F DE+F LKH G Sbjct: 36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYG 128
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27 Identity = 61/93 (65.59%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 408 VTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 VT KVFFDV IG K GRIV+GLFG+VVPKT ENF AL TGEKGYGYKG FHR+IKDFMIQ +SIYG +F DE+F LKH G Sbjct: 36 VTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYG 128
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 378 MAKDVELQA-KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 M + VE + K+T+KV+FD++ G+P GRIVMGL+G VPKTAENFRAL TGEKG+GY+G +FHR+IKDFMIQ SIYG+ FEDE+F L+H Sbjct: 22 MGQTVEAKGPKITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRH 123
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.052e-26 Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 405 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKH 680 K+T+KVFFD++ G KP GR+V+GL+G VPKTAENFRAL TGEKG+GY+G +FHR+IKDFMIQ SIYG F DE+F L+H Sbjct: 32 KITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRH 123
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.052e-26 Identity = 57/90 (63.33%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 417 KVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 KVFFDV KP GRIVM L DVVP+TAENFRALCTGEKG+GYKGCSFHR+I +FM+Q SIYG+ F DE+F LKH G Sbjct: 5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTG 94
BLAST of FC869300 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26 Identity = 57/94 (60.64%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 405 KVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRALCTGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVG 686 KVT KV+FD+ G K GRIV+GL+G+VVPKT ENFRAL TGEKGYGYK FHR+IKDFMIQ SIYG F DE+F L+H G Sbjct: 27 KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTG 120 The following BLAST results are available for this feature:
BLAST of FC869300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869300 ID=FC869300; Name=FC869300; organism=Citrus clementina; type=EST; length=686bpback to top |