FC869316

Overview
NameFC869316
Unique NameFC869316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:29..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 290.812 bits (743), Expect = 4.815e-78
Identity = 152/191 (79.58%), Postives = 165/191 (86.39%), Query Frame = 2
Query:  116 PVLDKSEWVKGQAIR-QSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            PVLD  E++KGQ +R  S   VR  PSG SSLT+RA SYADE VKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLL++APGLGQY+SGAILFEETLYQSTTDGKKMVDVL+EQ IVPGIKVDKG +PL GSNDESWCQGLDGLA R+AAYYQQGARFA    + +    PSALAVK+
Sbjct:   11 PVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 201          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 3.815e-75
Identity = 151/190 (79.47%), Postives = 164/190 (86.32%), Query Frame = 2
Query:  128 KSEWVKGQAI---RQSTVSVRSLPSGPSSLTIRAGS-YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            KS+WVKGQ++   + S+VS       PS+LT+RA S YADE VKTAKT+ASPG GI+AMDESNATCGKRLASIGLENTEANRQAYRTLLV+APGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPL GS DESWCQGLDGLASRTAAYYQQGARFA    + +    PSALAVK+
Sbjct:   15 KSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 204          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.507e-75
Identity = 151/193 (78.24%), Postives = 168/193 (87.05%), Query Frame = 2
Query:  116 PVLDKSEWVKGQAI--RQSTVSVRSLPSGPSSLTIRAGS-YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            PVLDKSEWVKGQ++  RQ + +   L +  +SLT+RA S YADE VKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLV+APGLGQY+SGAILFEETLYQSTT+GKKMVDVLVEQNIVPGIKVDKGLVPL GSN+ESW QGLDGL+SRTAAYYQQGARFA    + +    PSALAVK+
Sbjct:   11 PVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKE 203          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.166e-70
Identity = 136/160 (85.00%), Postives = 147/160 (91.88%), Query Frame = 2
Query:  206 LTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            LTIRAGSYADE VKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTE NRQA+RTLLVT P LG+YISGAILFEETLYQSTTDG+K+VDVL+EQNI+PGIKVDKGLVPLAGSNDESWCQGLDGLASR+AAYYQQGARFA    + +    PSALAVK+
Sbjct:    2 LTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 161          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.404e-69
Identity = 142/187 (75.94%), Postives = 153/187 (81.82%), Query Frame = 2
Query:  128 KSEW-VKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            KSEW    QA     V+V        S+ +RAG+Y DE VKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST DGKK+VD+L EQ IVPGIKVDKGLVPLAGSN+ESWCQGLDGLASR AAYYQQGARFA    + +    PS LAVK+
Sbjct:   15 KSEWGATRQAAAPKPVTV--------SMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKE 193          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.453e-66
Identity = 130/155 (83.87%), Postives = 141/155 (90.97%), Query Frame = 2
Query:  221 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AF-QWPSALAVKK 682
            GSYADE VKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLVT P LG+YISGAILFEETLYQST DG+K+VDVLVEQNI+PGIKVDKGLVPLAGSN+ESWCQGLDGLASR+AAYYQQGARFA    + +    PSALAVK+
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKE 155          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.746e-63
Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = 2
Query:  131 SEWVKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AFQ-WPSALAVKK 682
            S W+  ++   ++ S  S P    S  IRAG+Y+DE VKTAK++ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISG+ILFEETLYQST DGK  VD L + NIVPGIKVDKGL PLAGSN+ESWCQGLDGLASR+A YY+QGARFA    + +    PSALAVK+
Sbjct:   14 SPWIGQRSFAHTSAS--SSPPPRVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKE 196          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.118e-50
Identity = 107/159 (67.30%), Postives = 120/159 (75.47%), Query Frame = 2
Query:  221 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFANGVLL*AFQWPSALAVKKPPGVL 697
            G Y +E +KTA TVAS GRGILAMDESNATCGKRL SIG+ENTE NR+AYR LLVTAPGLGQYISGAILFEETLYQST  GKK VDV+ EQNIVPGIKVDKGLVP   +   SWC GLDG  S  A YY+ GARFA        +W S +++   P ++
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTS-AAEYYKAGARFA--------KWRSVVSIPHGPSIM 176          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 86/134 (64.18%), Postives = 102/134 (76.12%), Query Frame = 2
Query:  227 YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFA 628
            Y DE +KTAK +A+PGRGILA DES  T GKR A I +ENTE+NRQAYR LL T+PG    +SG ILFEETLYQ T+DGK  VD+L+E  ++PGIKVDKGLV LAG+N E+  QGLD L +R   YY+ GARFA
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFA 141          
BLAST of FC869316 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.484e-42
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 2
Query:  221 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFA--NGVLL*AFQWPSALAVKK 682
            G YADE +K AK +A+PG+GILA DES  T GKRLASI +EN EANRQA R LL T+P   QY+SG ILFEETLYQ +++GK  V++L E N++PGIKVDKG+V LAG++ E+  QG D L +R   YY+ GARFA    VL      PS L++++
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQ 161          
The following BLAST results are available for this feature:
BLAST of FC869316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL4.815e-7879.58Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH3.815e-7579.47Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH6.507e-7578.24Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA2.166e-7085.00Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ1.404e-6975.94Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA1.453e-6683.87Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH9.746e-6368.65Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_CHLRE1.118e-5067.30Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH1.120e-4264.18Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA9.484e-4256.41Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC31010H10EF AbioticL1 Citrus clementina cDNA clone C31010H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869316 ID=FC869316; Name=FC869316; organism=Citrus clementina; type=EST; length=711bp
GAAGATAAGAATATAAGTGCTATAAGCTAAGGCCTCTCGAGCTCAGAACC
CTTTGCCAGAAGAAGCAAAGAGGAAAATGGCCTCAGCCTCGGCATCTTTA
CTCAAGTCATCATCCCCCGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCA
GGCCATCCGCCAGTCTACTGTCTCAGTCCGCAGCCTCCCCAGTGGCCCCT
CTTCCCTCACCATCCGTGCTGGTTCCTATGCCGATGAGCCTGTCAAGACC
GCGAAAACTGTTGCATCACCAGGACGTGGAATTTTGGCCATGGATGAGTC
AAATGCAACTTGTGGAAAACGCCTTGCCTCAATTGGGTTAGAGAACACTG
AGGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGCCCCTGGTCTT
GGACAGTACATCTCTGGTGCCATCCTTTTTGAGGAGACTCTCTACCAATC
CACCACCGATGGCAAGAAGATGGTCGATGTTCTTGTTGAGCAAAACATTG
TCCCCGGTATCAAAGTCGACAAGGGTTTAGTGCCCCTTGCTGGTTCCAAT
GATGAGTCATGGTGCCAGGGTCTTGATGGCCTGGCTTCTCGCACTGCTGC
TTACTACCAACAGGGAGCTCGTTTCGCCAATGGCGTACTGTTGTGAGCAT
TCCAATGGCCATCTGCCTTGGCAGTCAAGAAGCCGCCTGGGGTCTTGCCG
CTATGCTGCCA
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