FC872145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: DHB4_HUMAN (Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.887e-32 Identity = 83/206 (40.29%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 121 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAI-DLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSV-VKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 + QKLP ++ YTE +A +YALGVGA +D D LK++Y G LPTF + + G + ++PGL + +LHG+QY+ELYKP P + ++ EA +A + DKG ++ ++ SY+ + EL+C N+ + FL G+GGF K + V V V IP P AV D T +QA +YRLSGD+NPLH DP Sbjct: 328 IGQKLPPFSYAYTELEAIMYALGVGASIKDPKD---LKFIYE--GSSDFSCLPTFGVIIGQKSMMGGGLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSEK--ELICHNQFSLFLVGSGGFG--------GKRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDP 518
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: DHB4_MOUSE (Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 4.647e-31 Identity = 78/205 (38.05%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 121 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAI-DLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 + KLP + +YTE + +YALGVGA ++ D LK+VY G LPTF + + + +G + ++PGL + LHG+QY+ELYKP P S ++ EA IA + DKG ++ ++ SY+ + EL+C N+ + F+ G+GGF + V +P P AV D T +QA +YRLSGD+NPLH DP Sbjct: 327 VGHKLPSFSSSYTELQSIMYALGVGASVKNPKD---LKFVYE--GSADFSCLPTFGVIVAQKSMMNGGLAEVPGLSFNFAKALHGEQYLELYKPLPRSGELKCEAVIADILDKGSGVVIVMDVYSYSGK--ELICYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDP 517
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: DHB4_RAT (Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 1.035e-30 Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 118 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAI-DLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 ++ KLP + +YTE +YALGVGA ++ D LK+VY G LPTF + + + SG + ++PGL + +LHG+QY+ELYKP P S ++ EA IA + DKG ++ ++ SY+ + EL+C N+ + F+ G+GGF + V +P P AV D T +QA +YRLSGD NPLH DP Sbjct: 326 VVGHKLPSFSSSYTELQCIMYALGVGASVKNPKD---LKFVYE--GSADFSCLPTFGVIVAQKSLMSGGLAEVPGLSINFAKVLHGEQYLELYKPLPRSGELKCEAVIADILDKGSGIVIVMDVYSYSGK--ELICYNQFSVFVVGSGGFGGKRTSEKLK-------AAVAVPSRPPDAVLRDTTSLNQAALYRLSGDSNPLHIDP 517
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: FOX2_NEUCR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa GN=fox-2 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.352e-30 Identity = 78/196 (39.80%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 148 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 +T+TERD +Y LG+GA D +KY++ G + +V+PTF + F E + D P +LLHG+QY+E+ K P P+S + ++ + + DKG AAI++ ++NAE+GE L N MT FLRG GGF +P + + K P P AV E T QA +YRLSGDYNPLH DP Sbjct: 628 YTFTERDVCLYNLGIGAKRTD------IKYIFE--GNEDFEVVPTFGVIPPFNTEMPFSFDDIVPNFSPMMLLHGEQYLEVRKYPIPTSGRLVSKGKLLEVVDKGSAAIVKQGITTFNAETGEELFYNEMTVFLRGCGGFGGQKKPAD----RGASTAANKPPARSPDAVVEVQTTEEQAAIYRLSGDYNPLHVDP 811
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: MFEB_DICDI (Probable 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase OS=Dictyostelium discoideum GN=mfeB PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22 Identity = 66/213 (30.99%), Postives = 109/213 (51.17%), Query Frame = 1 Query: 103 INPELLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAID-LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQ-PFAVFEDYTQPSQALVYRLS-GDYNPLHSDP 732 ++ + +++ K+ + T +D A+YA+ +G CG+ LK+VY G LPT +F ++ + + G++ DP +LLHG+Q +E+ P E+ I L+DKGK A+L ++ + SG+ + N + F+RG GGF P ++IPK + P A+ + T QA++YRL+ GD NPLH DP Sbjct: 3 VDVKKVINHKIKPIEYNLTRKDVALYAISLG-CGKK-----HLKFVYE--GSDNFSALPTLGVIFPGQMIVDVISEGIDGIEFDPMMLLHGEQELEILNEIPVEGVFVTESKITNLYDKGKGALLILQCITSEKSSGKPIFKNIFSFFIRGIGGFGGDRGPNE---------KPIQIPKDRAPDAISKQATSEDQAVIYRLAGGDLNPLHIDP 198
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: FOX2_YEAST (Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae GN=FOX2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.512e-18 Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 124 SQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYMELYKP-FPSSASIRNEACIAGLHDK-GKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQ-PFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 S++L + F YT +D +Y LG+G + ELKY Y EN F QVLPTF+ + + + A+D + +LLHG+QY +L P PS+ +++ A + DK GKAA++ ++Y+ ++ +L+ N + F+RGA + K V ++P + P E T QA +YRLSGD+NPLH DP Sbjct: 616 SKELDDGLFKYTTKDCILYNLGLGCTSK------ELKYTY-ENDPDF-QVLPTFAVIPFMQATATLAMDNLVDNFNYAMLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVVGGFETYDIKTKKLIAYNEGSFFIRGA--HVPPEKEVRDGKRAKFAVQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDP 811
BLAST of FC872145 vs. ExPASy Swiss-Prot
Match: FOX2_CANTR (Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14 Identity = 61/200 (30.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 139 EKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQH-DPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDP 732 + + + +RD +Y + +GA + +LKYVY EN F QV+PTF L +F S L++ +P LLLHG+ Y++++ P P+ I+ KG ++ +KS + +SGEL+ N T F+R + Y+ + PK P + A +YRLSGD NPLH DP Sbjct: 630 DPVWRFDDRDVILYNIALGATTK------QLKYVY-ENDSDF-QVIPTFGHLITFNSGKSQNSFAKLLRNFNPMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQADNKV-----YADRPAFATNQFLAPKRAPDYQVDVPVSEDLAALYRLSGDRNPLHIDP 816 The following BLAST results are available for this feature:
BLAST of FC872145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872145 ID=FC872145; Name=FC872145; organism=Citrus clementina; type=EST; length=732bpback to top |