FC872162

Overview
NameFC872162
Unique NameFC872162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC872162 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14
Identity = 42/140 (30.00%), Postives = 76/140 (54.29%), Query Frame = 3
Query:  216 ELISMDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKA-EQSSLITMVSIPDGLESHEADRRDLHKVRPSMLTVMPGCL---RNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGI 623
            ++I   ++PHV+ +P+PAQGH  P+M+++  +   G  VTFV+T + H +   S    A +        SI DGL   E D      +     + M  CL   R L++++N  ++   +SC+++D  + + L+VAE++G+
Sbjct:    4 QIIHNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLP--ETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELGV 141          
BLAST of FC872162 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11
Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 3
Query:  240 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH-----MHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRD----LHKVRPSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLH 677
            PHV+++PFP QGH  PLM+L+  +   G +VTFV T++     + AK  A++   A  S+   +  I DGL S    + D    +  +R + L      LR L ++V +  D   ++CV+ D+ + +A   A + GI        +   L   LH
Sbjct:   11 PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGL-SLSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEV-EGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLH 163          
The following BLAST results are available for this feature:
BLAST of FC872162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH3.831e-1430.00Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI3.964e-1130.32Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionC05701D01SK AbsCOv1 Citrus clementina cDNA clone C05701D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872162 ID=FC872162; Name=FC872162; organism=Citrus clementina; type=EST; length=724bp
CGGCCGGGGTCCGGCATTTATTAATAACAGATAACATCAAACATGCAAAA
CAAATAGATGTTGAAATTTCAGGATTCTTTCTGCATTTTTTGTGGAACTG
AGGATCTTCAACTCTTAATTAATCTATCCCAAGGGACTCCAATGATAATT
TGACAATATTCTCTTTGAGTTCTTGGTAATATTGTGTATCGCTTTCGGTT
CACAAGGAAAAGTTTGAACTAATTTCAATGGACAGGGAGCCTCACGTTCT
AGTGATACCATTCCCAGCACAAGGTCATGCTGGACCACTGATGAAATTGT
CGACAAAGATTGCTGAACATGGAATCAAGGTCACATTTGTTAGCACGGAG
CATATGCACGCCAAAATCACGGCTTCAATGCCACAGAAAGCCGAACAGTC
TAGCTTGATAACGATGGTTTCAATTCCTGATGGATTGGAGTCACATGAAG
CTGACCGAAGAGATTTGCACAAGGTGAGACCGAGTATGTTAACAGTCATG
CCAGGCTGCTTGAGGAACTTGATTGAGAAGGTTAACAAATCAAATGATTG
CGAGAAAATCAGCTGTGTAATTGCTGATCTTACTGTTGGATGGGCATTAG
AAGTTGCCGAGCAGATGGGAATTGCGAGAGCTGCAGTCATTCCTTATGCA
CCAGCAAGCTTGGCCCTGGTACTTCATGCTCCAAACTCGTTGAGGCGGGA
CTTTTAGATTCTAATGGAAATGCA
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