FC872367

Overview
NameFC872367
Unique NameFC872367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length878
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig321 contig Ccv1_Contig321:48..925. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.210e-47
Identity = 93/215 (43.26%), Postives = 141/215 (65.58%), Query Frame = 2
Query:   62 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALV--LXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 700
            ++V LLG   SPFV RV++AL+ KGV +Y+++EE++ NKS  LL+ NPV+KKVPVF+H E+ + ESL+I+EYIDETW+ NP+LP DPYQRA+ARFW+K+ ++ +  A    V  +               L+ +E E K K    F  GE   G +++A  +I +W+P+++E    Q+   +KFP++ +WS +F+NHP + E LP RD +  YF+
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGV-EYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKK---FFGGE-EFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.750e-41
Identity = 93/212 (43.87%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   65 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 700
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPVYKKVPV IH  K + ES+IILEYIDET+E   +LP+DPY RA+ARFWAK+ ++ +A                       L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  ++W  +++N   + E+LP RD++L +FR
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFAGD-KFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFR 209          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.286e-41
Identity = 91/212 (42.92%), Postives = 130/212 (61.32%), Query Frame = 2
Query:   65 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 700
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NP++KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFWAK+ ++ +       +                L+ ++ E K K    F  G+   G+ ++A   + +WL V+EEA    ++  +KFP   +W  +++N   IKE+LP RD++L ++R
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYR 209          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.899e-41
Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   65 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 700
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPV+KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFW+K+  + +A                       L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  + W  +++N   +KE+LP+RD++L +FR
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGV-KYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFR 209          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.453e-35
Identity = 86/221 (38.91%), Postives = 128/221 (57.92%), Query Frame = 2
Query:   62 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAK-YSEELMAKAFMALVLXXXXXXXXXXXXXXGL-EKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWL--PVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFRKVSE 712
            +EV LLG WASPF  RV++AL+ KG+  YEY+EE + NKSP LL LNP++KKVPV +H  K + ES +ILEYIDETW QNP+LP+DPY+R+ ARF+AK   E++M   F+++                 L   +E E  GK       G   +G+L+   G ++ +     WE  G  +V+  +KFP    W        ++K+ +P R++ + +   ++E
Sbjct:    5 EEVKLLGIWASPFSRRVEMALKLKGI-PYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYF----GGKTVGFLDFVAGSLIPFCLERGWEGIG-LEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAE 219          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.343e-33
Identity = 81/212 (38.21%), Postives = 118/212 (55.66%), Query Frame = 2
Query:   65 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFR 700
            EV LLG   SPF  RV+ AL+ KGV  YE+IEED+ NKSP LL+ NP++KK+PV IH  K + ES++ILEYIDE +E   +LP+DPY RA+ARFWAKY E+  A  + +                  L+ ++ EFK K   +        G+ ++       +L + EE     +   +KFP    W  ++      +E  P+RD++L+ +R
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGV-KYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFV----GDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDELLIRYR 207          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 2
Query:   65 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWE-----QNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVL---XXXXXXXXXXXXXXGLEKIEGEF----KGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFRK 703
            E+ LLG W+SP+  RV+V L  K +  YEY+EE++ +KS  LL  NPV+K VPV +H  + VNES +I++YIDE W      +  ++P DPY+RA+ARFWA Y ++ +  A++A++                   LE +EG F    KGK       G   +G++++  G  L W    ++    +++DP + P +  W  +F      K  +P     L+ FR+
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSL-PYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFF----GGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQ 225          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.456e-28
Identity = 70/209 (33.49%), Postives = 115/209 (55.02%), Query Frame = 2
Query:   56 MAKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKYSEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAE---GESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLP 670
            M+ EV LL  WAS +  R ++AL +KGV  YEY EE++ N+SP LL++NP++KK+PV IH  K + ES II++YIDE W +++PL+P DPY+R+ ARFW  Y ++ +   +  + L              G +++   FK     L  +   G+   G+++L       W   +E  G+F++   ++ P +  W  + +    +   LP
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGV-RYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWL------SKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLP 200          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.101e-27
Identity = 75/222 (33.78%), Postives = 119/222 (53.60%), Query Frame = 2
Query:   62 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNP--LLPRDPYQRAMARFWAKYSEELMAKAFMAL-VLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLPARDQMLVYFRKVSEEF 718
            +EV LL FW S F  R+++AL +K +  YEY EED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++ +      L                  L+ +EG    K    +  GES  G++++A      W   +E  G+F      + P    W+ + +    + ++LP + ++L + + + ++F
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKP---YFGGES-FGFVDIALIGYYSWFYAYETFGNFST--EAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of FC872367 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 72/206 (34.95%), Postives = 111/206 (53.88%), Query Frame = 2
Query:   59 AKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKY-SEELMAKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGESNIGYLELAFGWILYWLPVWEEAGSFQVLDPQKFPVITEWSTKFVNHPLIKENLP 670
            +  V LL FW S F  R+++AL  KG+  YE  EE++ +KSP LLE+NPV+KK+P+ IH  K + ESL ILEYIDE W ++ PLLP DPY+R+ ARFWA Y  +++ +                       L+ +EGE   K+      G  N+G++++A      W   +E   +F +    + P +  W+   +    + ++LP
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGI-KYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYF----GGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLP 201          
The following BLAST results are available for this feature:
BLAST of FC872367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTX6_SOYBN6.210e-4743.26Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_TOBAC1.750e-4143.87Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.286e-4142.92Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC3.899e-4142.92Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_ARATH5.453e-3538.91Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_SOLTU1.343e-3338.21Probable glutathione S-transferase OS=Solanum tube... [more]
GSTU6_ORYSJ5.282e-3033.78Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX3_SOYBN6.456e-2833.49Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX4_TOBAC1.101e-2733.78Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC2.453e-2734.95Probable glutathione S-transferase parA OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2DH10ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB2DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872367 ID=FC872367; Name=FC872367; organism=Citrus clementina; type=EST; length=878bp
CGCGCCGGGGATCACAAAGCATTACATAGATCAATTAACTATCAGCGAAA
ATAATATGGCCAAAGAAGTGACGCTTTTGGGGTTTTGGGCAAGTCCATTT
GTGTTCAGGGTAAAAGTCGCTCTGCAGCAGAAGGGTGTTGTTGATTATGA
ATACATTGAAGAAGACATCTTTAACAAGAGCCCCAGGCTCTTGGAACTGA
ACCCAGTTTATAAGAAGGTTCCTGTGTTCATCCATGGCGAGAAAGTGGTC
AATGAATCGTTGATTATTCTTGAGTACATCGATGAGACATGGGAGCAAAA
TCCTTTGTTGCCTCGAGACCCTTACCAAAGAGCCATGGCTCGTTTCTGGG
CTAAATATTCAGAAGAACTGATGGCGAAAGCATTTATGGCTCTGGTTTTG
AAAGGAGAGGCAAAGGAGAAAAATGCGAAAGAATTTGCAGAAGGATTGGA
GAAGATAGAAGGGGAATTCAAGGGAAAGAGCGGCTTATTGTTTGCTGAAG
GAGAGAGCAATATTGGGTATTTGGAACTTGCATTTGGTTGGATTCTTTAC
TGGCTGCCTGTTTGGGAAGAAGCTGGATCCTTTCAAGTTCTTGACCCTCA
GAAATTTCCAGTCATCACTGAATGGAGCACCAAGTTTGTGAATCACCCTC
TCATCAAAGAAAACTTGCCGGCCAGGGACCAGATGCTCGTCTATTTCCGC
AAAGTCAGTGAAGAGTTCTTTACCTTATTCCGAGCATAGAGCATCCAAGA
ATTATTGATCAAATAATATCTGTGCTAATAAAGGTGGTGTTGTGGTGTGT
TGTAATGACTTGTATTTTATTTTCCTCTTTCTTTGCATCTTTATTTCAAT
TTTGTAATAAAATTACTCTTTTATTAAA
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