FC872371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872371 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.274e-77 Identity = 157/300 (52.33%), Postives = 187/300 (62.33%), Query Frame = 1 Query: 43 MTAVADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPP-KGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKLLCTNGKKPRDPHEEMCCWHCCGFFEGLFDG 933 M A+ DSKP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY +PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK C NG + RDP F + FDG Sbjct: 1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFDG 291
BLAST of FC872371 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.033e-75 Identity = 154/300 (51.33%), Postives = 185/300 (61.67%), Query Frame = 1 Query: 43 MTAVADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPP-KGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSHDSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKLLCTNGKKPRDPHEEMCCWHCCGFFEGLFDG 933 M A+ D+KP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY +PP E+N AA V WL GLQ LPEN EAN++ VA+MGHSRGG AF L+L Y A++G+DPVAG + + L+P ILS DSF+FSIP +C+ CAPE NHE+FF RC S AHF A DYGHMDILDDNP K+WA+SK C NG + RDP F + F G Sbjct: 1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSKT-TGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFFYG 291
BLAST of FC872371 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.365e-53 Identity = 112/233 (48.07%), Postives = 149/233 (63.95%), Query Frame = 1 Query: 181 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIP-XXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKLLCTNGKKPR 870 PPKP+ I P GTY V+LFFHG L N YS++L+H+ASHGYI+VAPQL LPP G EV+DA +V+NW S L++ LP +V AN Y +L+GHSRGG AF +ALG+A SI SAL+GIDPVAG + + +P IL++ +SFE IP M PCAP + NHE+F+K C + AHF A DYGHMD+LDD+ G + ++ +C NG++ + Sbjct: 41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAG-TNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKK 270
BLAST of FC872371 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.126e-41 Identity = 98/238 (41.18%), Postives = 135/238 (56.72%), Query Frame = 1 Query: 181 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGHSRGGLIAFGLAL---GYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFS---IPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKLLCTNGKKPR 870 PPK L + P E+G Y V++ HG L N+ YS L+ H++SHG+I++APQLY P E+ A +++WLS GL LP V NL+ AL GHSRGG AF +AL GY++N +KIS L+GIDPV G + PP+L++ +SF+ I PCAP NH +FF+ C HF AKDYGH+D+LDD+ +G + + S LC NG++ R Sbjct: 41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSN----LKISTLIGIDPVDGTGK-GKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFREC-QGPAWHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEERR 271
BLAST of FC872371 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.850e-39 Identity = 99/263 (37.64%), Postives = 143/263 (54.37%), Query Frame = 1 Query: 106 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGHSRGGLIAFGLALGYATNPPVSIKISALVGIDPVAGLASVHSELEPPILSH--DSFEFSIPXXXXXXXXXXXXKCMQPCAPENKNHEQFFKRCTYSDHAHFDAKDYGHMDILDDNPQGPKNWAISKLLCTNGKKPR 870 + VF G + + + P+PL I+ P+E G Y V+LF HGT LSN YS +++ASHG+IVVAP+L+ PPK E++ AA+V NW+ LQ L VE +L +A+ GHSRGG AF LALG+ +N + + SAL+G+DPVAG SV P +L++ +SF SIP CAP + +H+QF+ C + +HF YGHMD+L++ P +S L+C +P+ Sbjct: 34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGF-SNIKLDVTFSALIGVDPVAG-RSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNH---TISCAPNHVSHQQFYDECK-ENSSHFVITKYGHMDMLNEFRLSPIAVTMS-LMCAQSFRPK 289 HSP 2 Score: 23.8682 bits (50), Expect = 2.850e-39 Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 2 Query: 845 CARMERNQGIPMRRCVAGIAAAFLKAY 925 CA+ R + MRR + GI AFL AY Sbjct: 282 CAQSFRPKAT-MRRTLGGIMVAFLNAY 307 The following BLAST results are available for this feature:
BLAST of FC872371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872371 ID=FC872371; Name=FC872371; organism=Citrus clementina; type=EST; length=934bpback to top |