FC872377

Overview
NameFC872377
Unique NameFC872377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9833 contig Ccv1_Contig9833:9..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_PHAVU (Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 2.996e-109
Identity = 190/257 (73.93%), Postives = 222/257 (86.38%), Query Frame = 3
Query:   48 IEGFNFQQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDISLGHPKM 818
            +EGF F+QRHGK RVRVARVWR+ +GRHF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LSVE+FAILLAKHF SFY++VT AIV IVEKPWE V VDGQ H+HGF LGSE+HTTE  VQ+SG+LQ+TSGIEGL++LKTT+SGFE FIR+KYTALPDT+ER+LATEVT+ WRYSYES++NLPQKPLYFT++YL VKKVL DTFFGPP  GVYS SV +TLY MAKA L RF DI+  H KM
Sbjct:    6 VEGFKFEQRHGKERVRVARVWRTPQGRHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSVEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHQHGFTLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQSGFENFIRNKYTALPDTRERILATEVTALWRYSYESLYNLPQKPLYFTDKYLEVKKVLADTFFGPPNRGVYSPSVQNTLYLMAKATLNRFPDIAYVHLKM 262          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC1_SOYBN (Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 390.578 bits (1002), Expect = 5.651e-108
Identity = 187/251 (74.50%), Postives = 220/251 (87.65%), Query Frame = 3
Query:   48 IEGFNFQQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDIS 800
            +EGF F+QRHGK RVRVARVW++++G+HF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LS EEFAILLAKHF SFY++VT AIV IVEKPWE V+VDGQ HEHGFKLGSE+HTTE  VQ+SG+LQ+TSGIEGL++LKTT+SGF  FIRDKYTALPDT+ERM+ATEVT+ WRYSYES+++LPQKPLYFTE+Y  VKKVL DTFFGPPK GVYS SV +TLY MAKA L RF DI+
Sbjct:    7 VEGFKFEQRHGKERVRVARVWKTRQGQHFIVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEEFAILLAKHFVSFYQKVTGAIVNIVEKPWERVTVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQSGFVNFIRDKYTALPDTRERMVATEVTALWRYSYESLYSLPQKPLYFTEKYQEVKKVLADTFFGPPKGGVYSPSVQNTLYLMAKATLNRFPDIA 257          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC1_CANLI (Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 9.639e-108
Identity = 192/257 (74.71%), Postives = 219/257 (85.21%), Query Frame = 3
Query:   48 IEGFNFQQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDISLGHPKM 818
            + GF F QRHGK RV+VARVW++K+G +F+VEW V  SLLSD + +YV DDNSDIVATDT+KNTVYAKAKEC E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWE VSVDGQ HEHGFKLGSERHT E  VQ+SG LQ+TSGIEGL+LLKTTKSGFEGFIRDKYTALP+T ERMLATEVT+ WRYSYES++++PQKPLYFT++YL VKKVL D FFGPP  GVYS SV +TLY MAKA L RF +I+    KM
Sbjct:    6 VGGFKFDQRHGKERVQVARVWKTKQGWYFIVEWRVGNSLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSGIEGLSLLKTTKSGFEGFIRDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADNFFGPPNVGVYSPSVQNTLYLMAKAALNRFPEIASIQLKM 262          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC2_CANLI (Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.663e-107
Identity = 189/242 (78.10%), Postives = 213/242 (88.02%), Query Frame = 3
Query:   48 IEGFNFQQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKA 773
            + GF F QRHGK RVRVARVW++K+G +F+VEW V ISLLSD + +YV DDNSDIVATDT+KNTVYAKAKEC E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWE VSVDGQ HEHGFKLGSERHT E  VQ+SG LQ+TSGIEGL+LLKTTKSGFEGFIRDKYTALP+T ERMLATEVT+ WRYSYES++++PQKPLYFT++YL VKKVL DTFFGPP  GVYS SV +TLY MAKA
Sbjct:    6 VGGFKFDQRHGKERVRVARVWKTKKGGYFIVEWRVGISLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSGIEGLSLLKTTKSGFEGFIRDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADTFFGPPNVGVYSPSVQNTLYLMAKA 247          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC2_SOYBN (Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.392e-106
Identity = 187/257 (72.76%), Postives = 219/257 (85.21%), Query Frame = 3
Query:   48 IEGFNFQQRHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDISLGHPKM 818
            +EGF F+QRHGK RVRVARVW++++G+HF+VEW V I+L SD + +Y+ DDNSDIVATDT+KNTVYAKAKEC + LS E+FAILLAKHF SFY++VT AIV IVEKPWE V VDGQ HEHGFKLGSE+HTTE  VQ+SG+LQ+TSGIEGL++LKTT+SGF  FIRDKYTALPDT+ER+LATEVT+ WRYSYES ++LPQKPLYFTE+Y  VKKVL DTFFGPP  GVYS SV +TLY MAKA L RF DI+    KM
Sbjct:    7 VEGFKFEQRHGKERVRVARVWKTRQGQHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQSGFVNFIRDKYTALPDTRERILATEVTALWRYSYESQYSLPQKPLYFTEKYQEVKKVLADTFFGPPNGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKM 263          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_ARATH (Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 2.015e-97
Identity = 178/257 (69.26%), Postives = 207/257 (80.54%), Query Frame = 3
Query:   51 EGFNFQQRHGKARVRVARVWR-SKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDISLGHPKM 818
            +G    QRHGKARVRV RVWR + +G H  VEWNVSISLLS  + +Y  DDNSDIVATDTIKNTVY KAKEC ++LSVEEFAIL+ KHF SFY QV +AIV I+EKPWE VS+DG+ H HGFKLGSE HTTE  V++SG L +TSGI GLALLKTT+SGFE F+RDKYT LP+T+ERMLATEV ++WRYSYESV ++P K LYF+E+++ VKKVLMDTFFGPP+ GVYS SV  TLY M  AVL RF D+S  H KM
Sbjct:    6 DGIRLDQRHGKARVRVGRVWRHAHDGSHHFVEWNVSISLLSHCLSSYRLDDNSDIVATDTIKNTVYVKAKECGDRLSVEEFAILIGKHFCSFYPQVFTAIVNIIEKPWERVSIDGKPHLHGFKLGSENHTTEARVEKSGALNLTSGIGGLALLKTTQSGFERFVRDKYTILPETRERMLATEVNASWRYSYESVASIPTKGLYFSEKFMDVKKVLMDTFFGPPETGVYSPSVQRTLYLMGSAVLKRFADVSSIHLKM 262          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_RABIT (Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.212e-34
Identity = 91/242 (37.60%), Postives = 131/242 (54.13%), Query Frame = 3
Query:   75 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDI 797
            +GK  V+V  + R  +  H + E   S+ L   S   YV  DNSDI+ TDTIKNTV+  AK  K   S+E FA+ + +HF S +  V    V + E PW+ +  +G  H H F    +  H  EV  + SG   + SGI+ L +LKTT+SGFEGFI+D++T LP+ ++R  AT+V   WRY +        + + F   +  V+  +++ F GP  +G YS SV  TLY +    L R   I
Sbjct:   17 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLSSKQDYVYGDNSDIIPTDTIKNTVHVLAK-FKGIKSIEVFAMNICEHFLSSFNHVVRVHVYVEEVPWKRLEKNGVQHVHAFIHTPTGTHFCEVEQRRSGLPVIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYQH-------SQDVDFEATWDIVRDTVLEKFAGPYDKGEYSPSVQKTLYDIQVLTLSRVPQI 249          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_DICDI (Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.212e-34
Identity = 92/248 (37.10%), Postives = 136/248 (54.84%), Query Frame = 3
Query:   72 RHGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSII-AYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSV-DGQLHEHGFKLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDISLGH 809
            R+GKARVRV RV++     H + +++  + L        Y+  DNS +VATDT+KNTVY  A++ +E  S+EE+ ILL KHF + Y  V    V + E  W  +   +G+   H F+   E H+  VT     +  + SGI+ L ++KTT+SGFEGF RDKYT+L +T++R+ AT VT+ W Y+  SV         F +  L+V  +   T         YS SV  TL+ +AK V+ +   +   H
Sbjct:    8 RYGKARVRVLRVFKGPNEYHKVFDFDCRVLLRGAEFSETYLTGDNSKVVATDTMKNTVYVIAQK-EEFKSLEEYGILLGKHFLATYSWVNGVEVVMRENQWRRIKTSNGKEQAHSFQRDREIHSVTVTSSRDKSPVVVSGIDDLLIMKTTQSGFEGFHRDKYTSLKETKDRVFATVVTANWTYNTLSV----DYSKVFEQFKLSVFDIFAQT---------YSRSVQETLFLIAKDVISKVPQVEQVH 241          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_RAT (Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.501e-33
Identity = 90/242 (37.19%), Postives = 131/242 (54.13%), Query Frame = 3
Query:   75 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDI 797
            +GK  V+V  + R  +  H + E   S+ L   S   Y+  DNSDI+ TDTIKNTV+  AK  K   S+E FA+ + +HF S +  VT A V + E PW+    +G  H H F    +  H  +V    +G   + SGI+ L +LKTT+SGFEGFI+D++T LP+ ++R  AT+V   WRY          + + F   + AV+ +++  F GP   G YS SV  TLY +    L +  +I
Sbjct:   21 YGKDMVKVLHIQRDGK-YHSIKEVATSVQLTLRSKKDYLHGDNSDIIPTDTIKNTVHVLAK-FKGIKSIETFAMNICEHFLSSFSHVTRAHVYVEEVPWKRFEKNGVKHVHAFIHTPTGTHFCDVEQVRNGPPIIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYQ--------NRDVDFEATWGAVRDIVLKKFAGPYDRGEYSPSVQKTLYDIQVLTLSQLPEI 252          
BLAST of FC872377 vs. ExPASy Swiss-Prot
Match: URIC_PIG (Uricase OS=Sus scrofa GN=UOX PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.501e-33
Identity = 88/242 (36.36%), Postives = 131/242 (54.13%), Query Frame = 3
Query:   75 HGKARVRVARVWRSKEGRHFMVEWNVSISLLSDSIIAYVDDDNSDIVATDTIKNTVYAKAKECKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWECVSVDGQLHEHGF-KLGSERHTTEVTVQESGTLQMTSGIEGLALLKTTKSGFEGFIRDKYTALPDTQERMLATEVTSTWRYSYESVFNLPQKPLYFTERYLAVKKVLMDTFFGPPKEGVYSASVPSTLYQMAKAVLGRFHDI 797
            +GK  ++V  + R  +  H + E   S+ L   S   Y+  DNSD++ TDTIKNTV   AK  K   S+E FA+ + +HF S ++ V  A V + E PW+    +G  H H F    +  H  EV    +G   + SGI+ L +LKTT+SGFEGFI+D++T LP+ ++R  AT+V   WRY          + + F   +  V+ +++  F GP  +G YS SV  TLY +    LG+  +I
Sbjct:   21 YGKDMIKVLHIQRDGK-YHSIKEVATSVQLTLSSKKDYLHGDNSDVIPTDTIKNTVNVLAK-FKGIKSIETFAVTICEHFLSSFKHVIRAQVYVEEVPWKRFEKNGVKHVHAFIYTPTGTHFCEVEQIRNGPPVIHSGIKDLKVLKTTQSGFEGFIKDQFTTLPEVKDRCFATQVYCKWRYH-------QGRDVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEI 253          
The following BLAST results are available for this feature:
BLAST of FC872377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
URIC_PHAVU2.996e-10973.93Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2[more]
URIC1_SOYBN5.651e-10874.50Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2[more]
URIC1_CANLI9.639e-10874.71Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1[more]
URIC2_CANLI3.663e-10778.10Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1[more]
URIC2_SOYBN1.392e-10672.76Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1[more]
URIC_ARATH2.015e-9769.26Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 ... [more]
URIC_RABIT9.212e-3437.60Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1[more]
URIC_DICDI9.212e-3437.10Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV... [more]
URIC_RAT3.501e-3337.19Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3[more]
URIC_PIG3.501e-3336.36Uricase OS=Sus scrofa GN=UOX PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BA12ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872377 ID=FC872377; Name=FC872377; organism=Citrus clementina; type=EST; length=819bp
GGAAAAAGAAAAAGAAAGAAAATTAATAACCAAAAATGGCGAAAAAAATA
GAGGGATTCAATTTCCAGCAGCGACACGGGAAAGCTCGAGTGAGAGTTGC
AAGAGTTTGGCGAAGCAAAGAAGGCCGCCATTTTATGGTCGAATGGAACG
TCAGCATCAGCTTGCTCTCCGATTCCATCATCGCCTACGTTGACGACGAT
AACTCCGATATCGTCGCCACCGATACCATAAAAAATACTGTTTACGCTAA
AGCTAAGGAATGTAAAGAGCAACTTTCAGTCGAGGAATTTGCTATTTTAC
TCGCCAAGCACTTTACGTCCTTTTATCGCCAGGTTACTAGTGCCATAGTG
AGGATAGTGGAAAAGCCATGGGAATGTGTATCCGTGGATGGGCAACTGCA
TGAGCATGGTTTCAAACTTGGATCCGAGAGGCACACAACAGAGGTTACAG
TACAGGAGTCTGGTACTTTGCAGATGACTTCTGGCATTGAAGGACTGGCT
TTGCTGAAGACAACCAAGTCAGGTTTTGAAGGGTTTATTAGGGACAAATA
CACGGCTCTGCCTGATACTCAAGAAAGGATGCTGGCAACAGAGGTCACTA
GTACGTGGAGGTATTCTTATGAATCTGTCTTTAACCTCCCACAGAAACCG
CTTTACTTCACAGAGAGATACCTGGCTGTGAAAAAAGTTCTGATGGATAC
TTTCTTTGGTCCTCCGAAAGAGGGAGTATACAGTGCGTCTGTCCCAAGCA
CTCTTTACCAAATGGCAAAGGCCGTCCTTGGCAGGTTTCATGACATATCA
TTGGGTCATCCAAAAATGC
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