FC872379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT2_ARATH (tRNA isopentenyltransferase 2 OS=Arabidopsis thaliana GN=IPT2 PE=1 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.315e-87 Identity = 109/183 (59.56%), Postives = 136/183 (74.32%), Query Frame = 2 Query: 362 QNWGRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGPAVKI 910 +NWG ++ RF+ C IC+DA VLDRYVEQRVD M+DAGLLDEVYDIY ADYTRGLRQ+IGVREFEDFL ++ S L S + DDK +K+ +R IL DD+L+++LEEAIDRVKLNTRRL+R QKRR++ L+T+FGW+IHY+D+TE I KS+E W AQVV PA +I Sbjct: 214 ENWGCINASRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLLDEVYDIYKPGADYTRGLRQSIGVREFEDFLKIH--------LSETCAGHLTSLSNDDKVMKENLRKILNFPKDDKLRIMLEEAIDRVKLNTRRLLRRQKRRVSRLETVFGWNIHYIDATEYILSKSEESWNAQVVKPASEI 388 HSP 2 Score: 125.561 bits (314), Expect = 1.315e-87 Identity = 68/119 (57.14%), Postives = 80/119 (67.23%), Query Frame = 3 Query: 6 DSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLNDSAEDMDESCFGSLSG-DEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKINQYLSLYARTGVLPSKLYQGKAAE 359 D VPLI EI+SR+HIP +VGGT+YYIQA+VS FLL+D+AED +E C S D+ + PVAANRIHPNN+RKINQYLSL+A GVLPSKLYQGK AE Sbjct: 96 DFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECCADVASVVDQDMVVESVFGRDDLSHGYELLKELDPVAANRIHPNNHRKINQYLSLHASRGVLPSKLYQGKTAE 214
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT5_ARATH (Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis thaliana GN=IPT5 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.872e-17 Identity = 55/175 (31.43%), Postives = 92/175 (52.57%), Query Frame = 2 Query: 389 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYN-ANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESI---SCKSDEVWTAQVVGPA 901 R+NCCF+ VD + PVL +V +RVD M++ GL+DEV I++ +++DY+ G+R+AIGV E ++FL R+ +++ + + LLE AI+++K NT L Q +++ L + W++H VD+TE ++DE W V P+ Sbjct: 149 RYNCCFLWVDVSRPVLHSFVSERVDKMVEMGLVDEVRRIFDPSSSDYSAGIRRAIGVPELDEFL----------------------------------RSEMRNYPAETTERLLETAIEKIKENTCLLACRQLQKIQRLYKQWKWNMHRVDATEVFLRRGEEADEAWDNSVAHPS 289
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT7_ARATH (Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis thaliana GN=IPT7 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16 Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 392 FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISCKS----DEVWTAQVVGPAVKI 910 ++CCFI VD + PVL+ +V +RVD M++AGLL+EV +++N A+Y+ G+R+AIGV E ++L VDR K+ +L+ A+ +K NT L Q +++ L + +H VD+TE ++ DE W V P+ +I Sbjct: 152 YDCCFIWVDVSLPVLNSFVSKRVDRMMEAGLLEEVREVFNPKANYSVGIRRAIGVPELHEYLRNESLVDRATKSK-----------------------------------MLDVAVKNIKKNTEILACRQLKKIQRLHKKWKMSMHRVDATEVFLKRNVEEQDEAWENLVARPSERI 293
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: MOD5_HUMAN (tRNA isopentenyltransferase, mitochondrial OS=Homo sapiens GN=TRIT1 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 5.989e-15 Identity = 33/118 (27.97%), Postives = 57/118 (48.31%), Query Frame = 3 Query: 12 AVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLNDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKINQYLSLYARTGVLPSK-LYQGKAAEG 362 A LI +I +RD IP +VGGTNYYI++L+ L+N ++M ++ + P A ++HP++ RK+ + L ++ TG+ S+ L++ EG Sbjct: 102 ATALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGT--------EKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHTEEG 211 HSP 2 Score: 47.3654 bits (111), Expect = 5.989e-15 Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 2 Query: 395 NCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNA---------NADYTRGLRQAIGVREFEDFL 577 N C + + A VLD +++RVD M+ AGLL+E+ D + + DY G+ Q+IG +EF ++L Sbjct: 223 NPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYL 292
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: MOD5_MOUSE (tRNA isopentenyltransferase, mitochondrial OS=Mus musculus GN=Trit1 PE=2 SV=2) HSP 1 Score: 53.1434 bits (126), Expect = 1.314e-14 Identity = 34/120 (28.33%), Postives = 57/120 (47.50%), Query Frame = 3 Query: 6 DSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLNDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKINQYLSLYARTGVLPSK-LYQGKAAEG 362 + A LI +I +RD IP +VGGTNYYI++L+ L+ ++M + V P A ++HP++ RK+ + L ++ TG+ S+ L++ A EG Sbjct: 100 NKATALIEDIFARDKIPIVVGGTNYYIESLLWKVLITTKPQEMGTG--------KVVDRKVELEKEDGHELHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHAEEG 211 HSP 2 Score: 46.595 bits (109), Expect = 1.314e-14 Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 395 NCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV------YDIYNA---NADYTRGLRQAIGVREFEDFLS 580 N C + + A VLD +++RVD M+ AGLL+E+ Y++ N + DY G+ Q+IG +EF ++L+ Sbjct: 223 NPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRGFHRRYNLKNISENSQDYQHGIFQSIGFKEFHEYLT 293
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT3_ARATH (Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=IPT3 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 49/177 (27.68%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 389 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYN-ANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISCKSDEV-----WTAQVVGPA 901 R++CCF+ VD A PVL +V +RVD M+++G+++EV + ++ +N+DY+RG+++AIG EF+ F RN+ ++D + LL + ++ +K NT L Q+ ++ L+ + W I VD+T + + ++ W V GP+ Sbjct: 157 RYDCCFLWVDVALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEFDRFF----------------------RNEQFLNVED-------------REELLSKVLEEIKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFTKRRSKMDANVAWERLVAGPS 298
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT8_ARATH (Adenylate isopentenyltransferase 8, chloroplastic OS=Arabidopsis thaliana GN=IPT8 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14 Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 389 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV---YD-IYNANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGPAVKI 910 R+ CCF+ VD + VL Y+ +RVD M+++G+ +E+ YD Y+ +A G+ + IG+ EF+ + S+Y +R K S D K +EA+ +K NT RL + Q R+ L++ GWDI +D+T S S E+W V+ ++K+ Sbjct: 172 RYECCFLWVDVSVSVLFEYLSKRVDQMMESGMFEELAGFYDPRYSGSAIRAHGIHKTIGIPEFDRYFSLY-PPERKQK---------------------------MSEWDQARKGAYDEAVQEIKENTWRLAKKQIERIMKLKS-SGWDIQRLDATPSFGRSSREIWDNTVLDESIKV 320
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT_HUMLU (Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13 Identity = 57/189 (30.16%), Postives = 91/189 (48.15%), Query Frame = 2 Query: 389 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANAD------YTR-GLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISC--------KSDEVWTAQVVGPAVKI 910 R++CCF+ VD + VL Y+ +RVD M++ G+ DE+ + Y+ + TR GLR+AIGV EF+ + + D + + G +D +R + EEA+ +K NT L + Q ++ L+ GWD+ +D+TES K E+W QV+ P+VKI Sbjct: 162 RYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSATRTGLRKAIGVPEFDRYFEKFRPGDVEGEDPG----------------RDRVR-----------RGAFEEAVRAIKENTCHLAKRQIGKILRLKGA-GWDLRRLDATESFRAAMTSDSGEKCTEIWEKQVLEPSVKI 322
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: IPT1_ARATH (Adenylate isopentenyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=IPT1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.654e-13 Identity = 57/189 (30.16%), Postives = 89/189 (47.09%), Query Frame = 2 Query: 383 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV---YDIYNANADYTRGLRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLK-DCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNHLQTLFGWDIHYVDSTESISC---------KSDEVWTAQVVGPAVKI 910 + R+ CCFI VD + VL Y+ +RVD M+D+G+ +E+ YD + + G+R+AIGV EF+ + Y + K +K D +R K ++A+D +K NT L + Q +++ L+ GW+I VD+T S K E W QV+ P+VKI Sbjct: 193 DLRYECCFIWVDVSETVLYEYLLRRVDEMMDSGMFEELSRFYDPVKSGLETRFGIRKAIGVPEFDGYFKEY--------------------PPEKKMIKWDALR-----------KAAYDKAVDDIKRNTWTLAKRQVKKIEMLKDA-GWEIERVDATASFKAVMMKSSSEKKWRENWEEQVLEPSVKI 349
BLAST of FC872379 vs. ExPASy Swiss-Prot
Match: MOD5_SCHPO (tRNA isopentenyltransferase OS=Schizosaccharomyces pombe GN=SPAC343.15 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 9.079e-12 Identity = 34/107 (31.78%), Postives = 49/107 (45.79%), Query Frame = 3 Query: 21 LISEILSRDHIPFIVGGTNYYIQALVSPFLLNDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKINQYLSLYARTGVLPSKLY 341 +I EI S+ IP +VGGT+YY+Q+L L D+ + S +P P PV A + HP + RKI + L +Y TG PS++Y Sbjct: 84 VIDEIHSQGKIPIVVGGTHYYLQSL----LFEDTTLSAIDKLTNDSSPSKPPHPDSHILDDDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHTGRPPSEIY 186 HSP 2 Score: 35.039 bits (79), Expect = 9.079e-12 Identity = 21/65 (32.31%), Postives = 35/65 (53.85%), Query Frame = 2 Query: 389 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNA------NADYTRGLRQAIGVREF 565 R+ A + VL +++RVD M+ GL+DE+ + + + D+TRG+ Q IG +EF Sbjct: 199 RYKSLIFWAFADSLVLMPRLDKRVDKMLSHGLVDEIKSMKSLAESEKFSPDFTRGIWQCIGFKEF 263 The following BLAST results are available for this feature:
BLAST of FC872379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872379 ID=FC872379; Name=FC872379; organism=Citrus clementina; type=EST; length=910bpback to top |