FC872382

Overview
NameFC872382
Unique NameFC872382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length821
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig87 contig Ccv1_Contig87:431..1251. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 5.521e-95
Identity = 169/207 (81.64%), Postives = 185/207 (89.37%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSSGVG+ FTKEVIEAMAS NEKPLILALSNPTSQSECTAEEAYTW++GRAIFASGSPFDP EYNGK FVPGQANNAYIFPG G+GLVISGAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPFSNIR              YELG+ATRLP+P+NLVK AESCMY+PVYR+YR
Sbjct:  385 SLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSSGVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.250e-91
Identity = 158/207 (76.33%), Postives = 181/207 (87.44%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSSG G+TFTKEV+EAM+SFNEKP+ILALSNPTSQSECTAE+AYTWS+GR IFASGSPF P EYNGKV+V GQ+NNAYIFPGFGLGL+ISGAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF+NIR              YELG+A+RLP+P+NLV  AESCMY+P YRNYR
Sbjct:  441 SLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSSGAGQTFTKEVVEAMSSFNEKPIILALSNPTSQSECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 332.028 bits (850), Expect = 2.400e-90
Identity = 162/207 (78.26%), Postives = 176/207 (85.02%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQHFKKPWAHEHEPV  LL+ VK IKP +LIG+SGVG+TFTKEVIEAMASFNEKPLILALSNPTSQSECTA+EAYTW+KG+AIFASGSPFDP EY GKVFVPGQ+NNAYIFPG GLGLVISGAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP SNIR              YELG+ATRLPRP+NLVK AESCMY+P YR YR
Sbjct:  385 SLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.913e-89
Identity = 158/207 (76.33%), Postives = 178/207 (85.99%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSSG G+TFTKEV+E MAS NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDP EY GK+FVPGQANNAYIFPGFGLGL++SGAIRV D+MLLAASEALA QV+EEN++KGLIYPPF+NIR              Y+LG+A+ L RP++LVK AESCMY+P YR+YR
Sbjct:  383 SLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 325.865 bits (834), Expect = 1.720e-88
Identity = 155/207 (74.88%), Postives = 178/207 (85.99%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+SGVG+TFTKEVIEAMASFNE+P+I +LSNPTS SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ VPGQ+NNAYIFPGFGLG+VISGA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF+NIR              YELG+ATRLP+P++L K AESCMYTPVYR+YR
Sbjct:  433 SLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.537e-88
Identity = 153/207 (73.91%), Postives = 179/207 (86.47%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSSG G+TFTKEV+E M+S NEKP+ILALSNPTSQSECTAE+AYTWS+GRAIFASGSPF P EYNGK++V GQANNAYIFPGFGLGL+ISGAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF++IR              YELG+A+RLP+P+NLV  AESCMY+P YR YR
Sbjct:  442 SLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSSGTGQTFTKEVVETMSSLNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.363e-85
Identity = 150/207 (72.46%), Postives = 175/207 (84.54%), Query Frame = 3
Query:    3 ALQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            +LQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+SGVGRTFTKE+IEAM+SFNE+P+I +LSNPTS SECTAE+AYTWS+GR+IFASGSPF P EY GK FVPGQ+NNAYIFPG GLGLVISGA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF++IR              YELG+ATRLP P +LVK AE+CMYTPVYRNYR
Sbjct:  430 SLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.780e-85
Identity = 153/206 (74.27%), Postives = 175/206 (84.95%), Query Frame = 3
Query:    6 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSSG GRTFTKEV++AMA+FNEKP+I ALSNPTSQSECTAEEAY+WS+GRAIFASGSPF P EYNGKV+  GQANNAYIFPGFGLGL+ISGAIRVHDDMLL ASEALA +V++ENFEKG   PPFSNIR              YELG+ATRLP+P++LV  AESCMY+P YR+YR
Sbjct:  369 LQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIR-KISAHIAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.571e-84
Identity = 150/206 (72.82%), Postives = 170/206 (82.52%), Query Frame = 3
Query:    6 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 623
            LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+SG G+ FTKEV+EAMA+ N KPLILALSNPTSQSECTAEEAYTWS+G AIFASGSPFDP EY G+ FVPGQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IR              YELG+A+RLP+P +LVK AESCMY P YR++R
Sbjct:  380 LQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTSGKGKQFTKEVVEAMANINAKPLILALSNPTSQSECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of FC872382 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.287e-47
Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 3
Query:   18 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXXYELGVATRLPRPQNLVKCAESCMYTPVYRNY 620
            K  +AHEH  + NL D VK IKP++LIG + +G  FTKE+++ MA+FN++P+I ALSNPTS++ECTAE+ Y +++GR IFASGSPFDP    NGK   PGQ NN+Y+FPG  LG++  G   + +D+ L  +E +A+QV+EEN ++G +YPP   I+              Y    A+  P+P++L    +S +Y+  Y ++
Sbjct:  340 KTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAEVIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFIQSQIYSTDYNSF 541          
The following BLAST results are available for this feature:
BLAST of FC872382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_VITVI5.521e-9581.64NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR8.250e-9176.33NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_POPTR2.400e-9078.26NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_PHAVU5.913e-8976.33NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ1.720e-8874.88NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR6.537e-8873.91NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE1.363e-8572.46NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_SOLLC1.780e-8574.27NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_MESCR2.571e-8472.82NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_ANAPL4.287e-4744.06NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BB06ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872382 ID=FC872382; Name=FC872382; organism=Citrus clementina; type=EST; length=821bp
GGGCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTC
AACAATCTCTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGG
ATCATCTGGAGTTGGAAGAACTTTTACAAAAGAAGTAATCGAGGCCATGG
CCTCCTTCAATGAGAAACCTCTCATCCTGGCTCTCTCCAACCCAACCTCA
CAGTCAGAATGTACAGCTGAAGAAGCTTACACTTGGAGTAAGGGTCGTGC
AATTTTCGCTAGTGGAAGTCCATTTGATCCTTTTGAATACAATGGAAAAG
TTTTTGTTCCTGGCCAGGCCAACAATGCTTACATCTTCCCTGGATTTGGT
TTGGGTTTGGTCATCTCTGGAGCAATTCGGGTACATGACGACATGCTTCT
GGCAGCCTCGGAAGCCTTGGCAAAACAAGTGACAGAAGAGAACTTTGAGA
AGGGATTGATCTACCCACCATTTTCTAATATTAGAAAAATTTCAGCCAAT
ATAGCTGCTAATGTTGCTGCTAAGGCATATGAACTAGGCGTGGCTACGCG
TCTCCCTCGACCTCAGAATCTAGTGAAGTGCGCTGAAAGTTGCATGTATA
CCCCTGTCTACCGAAACTATCGTTAAATGTTCTGCCAAAATTTCTGTCTC
CGCTGAGTGTCTTTAAGCAAAAATAATGTCAAATAACTTGTTTTGGTGTG
TTATGGTGGCTTTTGTGCTTGTGTAAGTATTGCTGTATATGTGTACTTAT
CAAATGAAGGTGTTGGACCACTGCCTACATGGTTGAAGAATAGGAAAAAA
AAAAAAAAAAAAAAAAAAAAA
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