FC872399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.935e-54 Identity = 119/189 (62.96%), Postives = 142/189 (75.13%), Query Frame = 2 Query: 65 KSQLSSTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGM---DSWENGT-SIVFSAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 616 KSQLS T DSL++I+E +E V GSG HS+S ASFG DSW++G+ SI F+ PSKR+K +D +F SQ+++P + M +DN + +PEDSVPCKIRAKRGCATHPRSIAERERRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++NL KD E+CTCGC Sbjct: 185 KSQLSFTNHDSLARINEVNETP---VHDGSG-----HSFSAASFGAATTDSWDDGSGSIGFTVTRPSKRSKDMDSGLF-------SQYSLPSDT-SMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGC 357
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH129_ARATH (Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.577e-42 Identity = 101/178 (56.74%), Postives = 130/178 (73.03%), Query Frame = 2 Query: 68 SQLSSTGQDSLSQISEESENGIDGVS---SGSGRQNATHSYSTASFG---MDSWENGTS-IVFSAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 577 S+L S + S S + N + +S + + +N S S+ SFG ++W+N +S I F+ P KR+K + D F L++Q++MPQT+LEMAT++NL+NIPEDSVPC+ RAKRG ATHPRSIAERERRTRIS KLKKLQ+LVPNMDKQTSY+DMLDLAV+HIKGLQ+QVE Sbjct: 124 SRLKSELRFSSGSSSHQEHNSLPRISEVEAAAAARNGVAS-SSMSFGNNRTNNWDNSSSHISFTIDQPGKRSK--NSDFFT----LETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVE 294
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.263e-30 Identity = 73/152 (48.03%), Postives = 98/152 (64.47%), Query Frame = 2 Query: 191 SFGMDSWENGTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQFTMPQ---TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 610 +F W + +S + + KR DG +F N + L ++P+ T+ +M +VD L + +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ Q + L+ + +C C Sbjct: 201 NFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKC 351
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27 Identity = 71/156 (45.51%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 143 SSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 610 + GS T T S G+D + KT D D + L ++P++ ++ ++ LL+ DS+PCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVPNMD QT+ +DMLDLAVQ+IK LQ QV+ L + C C Sbjct: 243 NEGSASSKLTALARTQSGGLDQY----------------KTKDEDSASRRPPLAHHMSLPKS---LSDIEQLLS---DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.382e-26 Identity = 64/153 (41.83%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 152 SGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 610 SG + T Y + +FG+ + + S P+KR++ ++ + L + Q + + + +D + EDSVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+LVPNMDKQT+ +DML+ AV+++K LQ+Q++ L + + C C Sbjct: 107 SGSGSGTDGYFS-NFGIPANYDYLSTNVDISPTKRSRDMETQFSSQLK--EEQMSGGISGMMDMNMDKIF---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKC 253
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25 Identity = 60/129 (46.51%), Postives = 90/129 (69.77%), Query Frame = 2 Query: 239 APPSKRTKTLDG-----DIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 610 +P SKR++ ++ + + + S +P M+ + N+ N+ EDSV ++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML+ AV+++K LQ Q++ L ++ + CTC Sbjct: 129 SPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDM-NMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELTEEQKRCTC 256
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13 Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 215 NGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 583 NG S+ S P + + G + N +Q T PQ S AT + P+ KIRA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV+ L Sbjct: 82 NGFSVAGSLPNFQIPQGSGGGLMNQQGQTQTQ-TQPQASASTATGGTVAAPPQSRT--KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVL 200
BLAST of FC872399 vs. ExPASy Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11 Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 95 SLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVP---CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 595 S++ +SE+S++ S G+G +A T+S G S K+ K + D C D + Q+ A N P DS+ +RA+RG AT+ S+AER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q+E L L Sbjct: 144 SINNVSEDSQS-----SGGNGHDDAKCG-QTSSKGFSS--------------KKRKRIGKD---CEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKL 290 The following BLAST results are available for this feature:
BLAST of FC872399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872399 ID=FC872399; Name=FC872399; organism=Citrus clementina; type=EST; length=855bpback to top |