FC872409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872409 vs. ExPASy Swiss-Prot
Match: GLU2B_BOVIN (Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.837e-26 Identity = 67/204 (32.84%), Postives = 99/204 (48.53%), Query Frame = 2 Query: 275 PYREEDHDYTSTSYKTDVDDDLDMSEMTTPSS---PSWLEKIQQTVRNILQAVNLFQTPVDKSDAARVRKEYDESSDKLSKIQSRISSLTQKLKHEFGPEKEFYSFYGHCFESKQNKYVYKVCPYKKATQEE--GHSTTRLGSWDKF----EDSYHIMLFSNGDKCWNGPDRSMKVRLRCGLKNEVTDVDEPSRCEYVALLYTP 859 P EED D + D D++ + S+ P P+ + QT + A R +++E+ L ++ I +L Q++ +FGP EF Y C+E N+YVY++CP+K +Q+ G S T LG+W + D + M + G CW GP+RS VRL CG + VT EPSRCEY+ L TP Sbjct: 311 PTEEEDEDEEDEETEEDEDEEDEDSQGEQPKDAPPPAPAPQTASPTEEDRMPPYDEQTQAFINAAQEARNKFEEAERSLKDMEESIRNLEQEISFDFGPNGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKLGGSPTSLGTWGSWAGPDHDKFSAMKYEQGTGCWQGPNRSTTVRLLCGKETVVTSTTEPSRCEYLMELMTP 514
BLAST of FC872409 vs. ExPASy Swiss-Prot
Match: GLU2B_MOUSE (Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.218e-25 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 2 Query: 458 AARVRKEYDESSDKLSKIQSRISSLTQKLKHEFGPEKEFYSFYGHCFESKQNKYVYKVCPYKKATQEEGH--STTRLGSWDKF----EDSYHIMLFSNGDKCWNGPDRSMKVRLRCGLKNEVTDVDEPSRCEYVALLYTP 859 A R +++E L +++ I SL Q++ +FGP EF Y C+E N+YVY++CP+K +Q+ H S T LG+W + D + M + G CW GP+RS VRL CG + VT EPSRCEY+ L TP Sbjct: 363 AQEARSKFEEVERSLKEMEESIRSLEQEISFDFGPSGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKHGGSPTSLGTWGSWAGPDHDKFSAMKYEQGTGCWQGPNRSTTVRLLCGKETVVTSTTEPSRCEYLMELMTP 502
BLAST of FC872409 vs. ExPASy Swiss-Prot
Match: GLU2B_HUMAN (Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 4.941e-25 Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 434 QTPVDKSDAARVRKEYDESSDKLSKIQSRISSLTQKLKHEFGPEKEFYSFYGHCFESKQNKYVYKVCPYKKATQEE--GHSTTRLGSWDKF----EDSYHIMLFSNGDKCWNGPDRSMKVRLRCGLKNEVTDVDEPSRCEYVALLYTP 859 QT A R +++E+ L ++ I +L Q++ +FGP EF Y C+E N+YVY++CP+K +Q+ G S T LG+W + D + M + G CW GP+RS VRL CG + VT EPSRCEY+ L TP Sbjct: 362 QTQAFIDAAQEARNKFEEAERSLKDMEESIRNLEQEISFDFGPNGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKLGGSPTSLGTWGSWIGPDHDKFSAMKYEQGTGCWQGPNRSTTVRLLCGKETMVTSTTEPSRCEYLMELMTP 509 The following BLAST results are available for this feature:
BLAST of FC872409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872409 ID=FC872409; Name=FC872409; organism=Citrus clementina; type=EST; length=861bpback to top |