FC872416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.053e-20 Identity = 74/229 (32.31%), Postives = 115/229 (50.22%), Query Frame = 1 Query: 241 IANYHLCVVKTM-RLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLD----YEAI 897 + Y VV++ ++D+ VI A +K+I + GVG++ +DINAAT+ GI V PG GN S AE I LML RK + ++ E+KK G L GKT ++G G +G E+AKR + + ++A + ++ + VK D L+ + +DV+ + K+T G++ K MK G ++VN ARGG++D YEAI Sbjct: 39 VPKYEAIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPG---GNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKF---MGIELRGKTAGVIGLGRVGFEVAKRCKALEMNVLAYDPFVSKE-----RAEQIGVKLVDFDTLL-------------ASSDVITVHVPRTKETIGLIGKGQFEKMKDGVIVVNAARGGIVDEAALYEAI 243
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19 Identity = 68/243 (27.98%), Postives = 121/243 (49.79%), Query Frame = 1 Query: 193 PSIQVDVIPI-----SDAPDVIANYHLCVVKTM-RLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLG--VPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 P I+ D I I +DA D + + +V++ ++ ++ ++ +K++ + GVG++ +DI+ AT+ G+ V P GN S AE T ++ L+R + ++++ ++ G L GKT+ I+G G IG E+A+R R FG+ + H + A K G+ +E AD++ L K+T G++NK ++ KKG L+N ARGG++D A+ Sbjct: 17 PLIESDFIEIVQKNVADAEDELHTFDALLVRSATKVTEDLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPN---GNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTV---------HVFDPFLTEERAKKIGVNSRTFEE---------VLESADIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARGGIIDEAAL 238
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.376e-19 Identity = 65/220 (29.55%), Postives = 112/220 (50.91%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 L + + R+D V RA +++++ + VG + +D+ AT+ GI V PG +T A A + L K ++ + E KK GV G + GKT+ I+GFG IG +AKR R F ++I+ + S ++ L + +D+L+ E +D VV + LNK+T ++N+ L MK+ ++L+N+ARG ++D +A+ Sbjct: 50 LVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRIL-----YYSRTRKPEVEKELNAEFKPLDELLRE-------------SDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKAL 251
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18 Identity = 68/217 (31.34%), Postives = 110/217 (50.69%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIA 900 L V +D+ V++ A ++K++ + GVGL+ VD++AAT G+ V P T N S AE + L+L R+ E ++ K +G + GKTV ++G G IG +A R+ FG +IA A +++ L ++ DDL+ + AD + L +TAG+++K L+ K G ++VN ARGGL+D A+A Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFSGTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDPYVAP-----ARAAQLGIELMSFDDLL-------------ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEVALA 242
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 65/220 (29.55%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 L + + R+DS V A +++++ + VG + +D+ ATR GI V P +T A A + L + + + E K+ G+ G + GKT+ I+GFG IG +A+R R FG++I+ RS ++ L + ++DL+ E +D VV + L K+T ++N+ L MKK ++LVNIARG ++D +A+ Sbjct: 49 LVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAE-----KELGAEFRSLEDLLRE-------------SDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKAL 250
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18 Identity = 65/217 (29.95%), Postives = 112/217 (51.61%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIA 900 L V +D+ V++ A ++K++ + GVGL+ VD++AAT G+ V P T N S AE + L+L R+ ++ + K +G + GKTV ++G G IG +A+R+ FG ++A + +++ L ++ +DDL+ + AD + L +TAG+++K L+ K G ++VN ARGGL+D A+A Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-----ARAAQLGIELLSLDDLL-------------ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALA 242
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.732e-18 Identity = 65/217 (29.95%), Postives = 112/217 (51.61%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIA 900 L V +D+ V++ A ++K++ + GVGL+ VD++AAT G+ V P T N S AE + L+L R+ ++ + K +G + GKTV ++G G IG +A+R+ FG ++A + +++ L ++ +DDL+ + AD + L +TAG+++K L+ K G ++VN ARGGL+D A+A Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-----ARAAQLGIELLSLDDLL-------------ARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALA 242
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18 Identity = 69/222 (31.08%), Postives = 108/222 (48.65%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKRLRPFGVKII--ATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 LC++ T ++D+ V+ A +K+I + VG + +DI AT+ GI V PG +T + AE T+ L+L + R+ E I + P TG L GKT+ ++G G IGV AKRL F VKI+ +R W + + D+ +D+V + L K+T ++N+ L MKK + L+N ARG ++D EA+ Sbjct: 52 LCLL-TDKIDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTD---AVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNME-------------------FTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEAL 250
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17 Identity = 62/220 (28.18%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 L + + R+D+ V A ++K++ + VG + +DI AT+ G+ + P +T A A + + L + ++ + E KK GV G + G+T+ I+GFG IG +A+R + FG++I+ R+ + L + +D+L+ E +D VV + L K+T ++N+ L MK ++LVNIARG ++D EA+ Sbjct: 49 LVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVE-----KELGAEFMPLDELLKE-------------SDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEAL 250
BLAST of FC872416 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 66/216 (30.56%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 256 LCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--GETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAI 897 L V ++ +VI +A ++K+I + GVG++ +D+ AAT GI V P ++ S AELT+ LML R + ++++ + G L GKT+ ++G G IG ++ KR + FG+ II +A G+ +LVD DI + AD + + L +T I+ + ++ MKK +++VN ARGGL+D +A+ Sbjct: 45 LVVRSGTKVTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPD---ASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPYIPKE---------VAESMGV--ELVD------DINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKAL 240 The following BLAST results are available for this feature:
BLAST of FC872416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872416 ID=FC872416; Name=FC872416; organism=Citrus clementina; type=EST; length=905bpback to top |