FC872422

Overview
NameFC872422
Unique NameFC872422
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length819
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC872422_ssr779 microsatellite FC872422_ssr779:779..790. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.985e-80
Identity = 148/185 (80.00%), Postives = 166/185 (89.73%), Query Frame = 2
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            +GNEL+ KRIKEYRQKVE ELS I  D+M+VIDEHLIPS   GESTVFYYKMKGDYYRYLA FK+G+E+K  AD SMKAY++A+  AEA+L PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDIPED G++AQK++ +AK G GED
Sbjct:   76 KGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED-GEDAQKVNGTAKLGGGED 259          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 1.111e-79
Identity = 147/186 (79.03%), Postives = 168/186 (90.32%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            +RGNE +VKRIKEY QKVE+EL+ I  DIM VID+HLIPSC+ GESTVFY+KMKGDYYRYLA FK G+++K VA+LS+KAYQAA+T AEAEL+PTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD+L+E+SYKDSTLIMQLLRDNLTLWTSD+PED  ++AQK D + K G GED
Sbjct:   75 SRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPED-AEDAQKGDATNKAGGGED 259          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.512e-79
Identity = 145/186 (77.96%), Postives = 165/186 (88.71%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            ++GN+++ KRIKEYR KVE ELS I  D+M+VIDEHLIPS   GESTVFYYKMKGDYYRYLA FKTG+E+K   D SMKAY++A+T AEAEL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDIPED G+++QK + +AK G G+D
Sbjct:   75 SKGNDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED-GEDSQKANGTAKFGGGDD 259          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.199e-79
Identity = 151/186 (81.18%), Postives = 166/186 (89.25%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            A+GN++SVKRIKEYR KVE+ELS I +DIM VIDE+LIPS + GE +VF+YKMKGDYYRYLA FK+GDERK  AD SMKAYQ ASTTAEAEL+ THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG  E QK+D +  DG G+D
Sbjct:   75 AKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG--EEQKVDSARADG-GDD 257          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 2.094e-78
Identity = 147/186 (79.03%), Postives = 164/186 (88.17%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            ARGNE +VKRI+ YRQKVE+EL+ I  +IM VIDEHLIPSCT GESTVFYYKMKGDYYRYLA FKTGD++K V+DLS+KAYQ A+TTAEAEL  THPIRLGLALNFSVFYYEIMNSPERAC LAKQ FDEAISELD+L+E++YKD TLI+QLLRDNLTLWTSDIPED G+EA K D + K G GED
Sbjct:   75 ARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPED-GEEAPKGDAANKVGAGED 259          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 2.316e-77
Identity = 143/185 (77.30%), Postives = 162/185 (87.57%), Query Frame = 2
Query:    8 RGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKDGEGED 562
            +GN+++VKRIKEY +KVE ELS I  DIM V+DEHLIPS + GESTVF+ KMKGDYYRYLA FK+G+ERK  AD S+KAY+ A+T AEA+L PTHPIRLGLALNFSVFYYEIMN+PERACHLAKQAFDEAISELDTL+EESYKDSTLIMQLLRDNLTLWTSDI E+GGD+A K + SAK G G D
Sbjct:   76 KGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDAHKTNGSAKPGAGGD 260          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.717e-72
Identity = 134/177 (75.71%), Postives = 156/177 (88.14%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG----GDEAQ 523
            ++G+E +VKRIK YRQ+VE EL+KI +DI+ VIDEHL+PS T GESTVFYYKMKGDYYRYLA FK GD+RK  ++ S+KAY+AA+ TA ++L+PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELD+LSEESYKDSTLIMQLLRDNLTLWTSD+ E G    GDE Q
Sbjct:   73 SKGHEQNVKRIKTYRQRVEDELTKICSDILSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLEEGGEHSKGDERQ 249          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.997e-72
Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDISAKD 547
            ++GNE +VK+IK YRQKVE EL+ I  DI+ +ID+HLIP  T GE+TVFYYKMKGDYYRYLA FKT  ERK  A+ S+K Y+AA+  A  EL  THPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+PEDGG++  K + S ++
Sbjct:   78 SKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQE 258          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.959e-69
Identity = 130/177 (73.45%), Postives = 153/177 (86.44%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG----GDEAQ 523
            ++G++ +VKRIK Y+Q+VE EL+K +  +  VIDEH++PS T GESTVFYYKMKGDYYRYLA FK+GD+RK  AD S+KAY+AA+ TA A+L+PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELD+LSEESYKDSTLIMQLLRDN TLWTSD+ E G    GDE Q
Sbjct:   73 SKGHDQNVKRIKTYQQRVEDELTKYALTL-SVIDEHVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDLEEGGEHSKGDERQ 248          
BLAST of FC872422 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.171e-69
Identity = 126/168 (75.00%), Postives = 149/168 (88.69%), Query Frame = 2
Query:    5 ARGNELSVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLA*FKTGDERKNVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG 508
            ++GNE + KRIK+YR KVE ELSKI  DI+ VID+HL+P  T GESTVFYYKMKGDY+RYLA FK+G +R+  ADLS+KAY+AA+++A  ELS THPIRLGLALNFSVFYYEI+NSPERACHLAK+AFDEAI+ELD+L+E+SYKDSTLIMQLLRDNLTLWTSD+ E G
Sbjct:   73 SKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLEEGG 240          
The following BLAST results are available for this feature:
BLAST of FC872422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433D_SOYBN4.985e-8080.0014-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
14339_SOLLC1.111e-7979.0314-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
1433B_VICFA5.512e-7977.9614-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433C_SOYBN7.199e-7981.1814-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14338_SOLLC2.094e-7879.0314-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14339_ARATH2.316e-7777.3014-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
14337_SOLLC1.717e-7275.7114-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
14312_ARATH4.997e-7273.4814-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433_TOBAC3.959e-6973.4514-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
14311_ARATH5.171e-6975.0014-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1BE04ZM1 AbsCOv1 Citrus clementina cDNA clone KN0AAB1BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872422 ID=FC872422; Name=FC872422; organism=Citrus clementina; type=EST; length=819bp
GGGGGCCAGAGGGAATGAACTTAGTGTGAAAAGAATTAAAGAGTATAGGC
AAAAGGTAGAAGCTGAGCTGTCCAAGATCAGCACTGATATTATGCAAGTC
ATTGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTT
TTACTATAAAATGAAAGGTGATTATTATCGGTACTTGGCATAGTTTAAGA
CTGGTGATGAAAGGAAAAATGTTGCTGATCTGTCAATGAAAGCCTATCAG
GCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATCCG
ACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAACT
CTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCATC
TCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTGAT
AATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACCAG
AGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGATGGT
GAAGGCGAAGATTGAAGAAGCAGAGTGAACCAGCCAGGAGCTTGGGAGCT
CTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGACTCCCGGTGTT
TTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGTGCTGTTCCTAT
AATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATTGGACTGCTTGT
ATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCTGATCAAAAAAA
AAAAAAAAAAAAAAAAAAA
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