FC872460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: PR4A_TOBAC (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYHLY+P+ I WDL AASAFCATWDA+KPLAWRQKYGWTAFC GP GQ +CGRCLRVTN+GTG Q VRIVDQC+NGGL+LD V+ +LDTNG+GYQQG LTV YEFVN ND Sbjct: 34 TYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNGVGYQQGHLTVNYEFVNCND 147
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: PR4B_TOBAC (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49 Identity = 86/114 (75.44%), Postives = 96/114 (84.21%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYHLY+P+ I WDL AASAFCATWDA+KPLAWRQKYGWTAFC GP GQ +CGRCLRVTN+GTG Q VRIVDQC+NGGL+LD V+ +LDTNG+GYQQG L V YEFVN ND Sbjct: 34 TYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHLIVNYEFVNCND 147
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: PRP2_SOLLC (Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVN 461 TYHLY+P+ I WDL AS +CATWDA+KPL WR++YGWTAFC GP GQ +CGRCLRVTN+GTG Q+ VRIVDQC NGGL+LD V+ +LDTNG+GYQ+G L V YEFVN Sbjct: 32 TYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYEFVN 142
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.055e-43 Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYH+Y+P+ +GWDL A SA+C+TWDANKP AWR KYGWTAFC GP G+ +CG+CLRVTN+ TGAQ VRIVDQC+NGGL+LD V++++DT+G+G QQG L V Y+FVN D Sbjct: 85 TYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNCGD 198
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.876e-42 Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYH+Y+P+ +GWDL A SA+C+TWDANKPL+WR+KYGWTAFC GP G+ +CG+CLRVTN+ TGAQ VRIVDQC+NGGL+LD V++++DT+G G QG L V Y+FV+ D Sbjct: 86 TYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDCGD 199
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: HEVE_HEVBR (Pro-hevein OS=Hevea brasiliensis GN=HEV1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYHLY+ + GWDL AASA+C+TWDANKP +WR KYGWTAFC G GQ++CG+CL VTN+GTGA+ VRIVDQC+NGGL+LD V+++LDT+G GY++G +TV Y+FV+ D Sbjct: 76 TYHLYNSQDHGWDLNAASAYCSTWDANKPYSWRSKYGWTAFCGPVGAHGQSSCGKCLSVTNTGTGAKTTVRIVDQCSNGGLDLDVNVFRQLDTDGKGYERGHITVNYQFVDCGD 189
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: BARW_HORVU (Barwin OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 79/117 (67.52%), Postives = 89/117 (76.07%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDL--TAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLD-EGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYH Y P Q WDL A SA+CATWDA+KPL+WR KYGWTAFC GP GQ ACG+CLRVTN TGAQ RIVDQCANGGL+LD + V+ K+DTNGIGYQQG L V Y+FV+ D Sbjct: 9 TYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 125
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: WHW2_WHEAT (Wheatwin-2 OS=Triticum aestivum GN=PR4B PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.247e-40 Identity = 78/117 (66.67%), Postives = 88/117 (75.21%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDL--TAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLD-EGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYH Y P Q WDL A SA+CATWDA+KPL+WR KYGWTAFC G GQ ACG+CLRVTN TGAQ RIVDQCANGGL+LD + V+ K+DTNGIGYQQG L V Y+FV+ D Sbjct: 32 TYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGAHGQAACGKCLRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 148
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: WHW1_WHEAT (Wheatwin-1 OS=Triticum aestivum GN=PR4A PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.083e-40 Identity = 76/117 (64.96%), Postives = 88/117 (75.21%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDL--TAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLD-EGVYKKLDTNGIGYQQGFLTVTYEFVNSND 470 TYH Y P Q WDL A SA+CATWDA+KPL+WR KYGWTAFC G GQ +CG+CL+VTN TGAQ RIVDQCANGGL+LD + V+ K+DTNGIGYQQG L V Y+FV+ D Sbjct: 30 TYHYYRPAQNNWDLGAPAVSAYCATWDASKPLSWRSKYGWTAFCGPAGAHGQASCGKCLQVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDCRD 146
BLAST of FC872460 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.011e-39 Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 129 TYHLYHPEQIGWDLTAASAFCATWDANKPLAWRQKYGWTAFCHSGGPIGQTACGRCLRVTNSGTGAQQIVRIVDQCANGGLNLDEGVYKKLDTNGIGYQQGFLTVTYEFVN 461 TYH Y+P Q WDL A SA+C+TWDA+KP AWR KYGWTAFC GP GQ +CG+CLRV N+ T A VRIVDQC+NGGL+LD ++ ++DT+G GYQQG L V Y+FV+ Sbjct: 80 TYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVD 190 The following BLAST results are available for this feature:
BLAST of FC872460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872460 ID=FC872460; Name=FC872460; organism=Citrus clementina; type=EST; length=677bpback to top |