FC872776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.838e-25 Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 188 +KGCCVGPKKRVVTLRQSLLKQ SRLALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LKA Sbjct: 328 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 1.115e-22 Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 179 +KGCCVGPKKRVVTLRQ+LLKQ SRLA+EEIKLKFID +S GHGRFQT+QEKAK+YGR Sbjct: 328 IKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 386
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 101.293 bits (251), Expect = 1.610e-21 Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 182 +KGCCVGPKKRVVTLRQSLL Q SRLALEEIKLKFIDT+S FGHGRFQT+ EK ++Y R+ Sbjct: 328 IKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 387
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGCC+G KKR++TLR+SLLK R ALE+IKLKFIDTSSK GHGRFQT +K + G LK Sbjct: 333 IKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.144e-17 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC VG KKRV+TLR+SLL Q R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 333 LKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC VG KKRV+TLR+SLL Q R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 333 LKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC VG KKRV+TLR+SLL Q R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 333 LKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC VG KKRV+TLR+SLL Q R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 333 LKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 +KGC VG KKRV+TLR+SLL Q R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 333 LKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of FC872776 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.661e-16 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 3 VKGCCVGPKKRVVTLRQSLLKQMSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 185 ++GCCVG KKR +TLR+SL+ Q R A E+I LK+IDTSSKFGHGRFQT EK + G+LK Sbjct: 330 IRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390 The following BLAST results are available for this feature:
BLAST of FC872776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872776 ID=FC872776; Name=FC872776; organism=Citrus clementina; type=EST; length=413bpback to top |