FC872799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRRAP_MOUSE (Transformation/transcription domain-associated protein OS=Mus musculus GN=Trrap PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.088e-36 Identity = 94/288 (32.64%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 13 LEEESRVLRDF--HVVDVEIPGQYFSDQEVAPDHT-VKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQT-SLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLN--QAISGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKI----FQTDFHPAYDANGMIEFNEPVPFRLTRNMQSF 846 +EE+ R L +F +VEIPG++ + P H +K+ R + IV++H ++ RRL + G +G ++V + +R +ER+LQL R++N +K KE +RH+ P ++ V Q+R+VED+ + +E+Y+ CA+ E D PI+ + ++L QA Q S + + D+ ++ N V S+ ++ T N W F+K F IQLAL F F+L + +P + A++TGK+ F+ D + DA G ++ N PVPFRLT N+ F Sbjct: 2167 IEEKCRFLSNFSAQTAEVEIPGEFLMPK---PTHYYIKIARFMPRVEIVQKHNTAARRLHIRGHNGKIYPYLVMNDACLTESRREERVLQLLRLLNPCLEKRKETTKRHLFFTVPRVVAVSPQMRLVEDNPSSLSLVEIYKQRCAKKGIEHDNPISRYYDRLATVQARGTQASHQVLRDI----LKEVQSNMVPRSMLKEWALHTFPNATDYWTFRKMFTIQLALIGFAEFVLHLNRLNPEMLQIAQDTGKLNVAYFRFDIN---DATGDLDANRPVPFRLTPNISEF 2444
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRRAP_HUMAN (Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.088e-36 Identity = 94/288 (32.64%), Postives = 156/288 (54.17%), Query Frame = 1 Query: 13 LEEESRVLRDF--HVVDVEIPGQYFSDQEVAPDHT-VKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQT-SLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLN--QAISGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKI----FQTDFHPAYDANGMIEFNEPVPFRLTRNMQSF 846 +EE+ R L +F +VEIPG++ + P H +K+ R + IV++H ++ RRL + G +G ++V + +R +ER+LQL R++N +K KE +RH+ P ++ V Q+R+VED+ + +E+Y+ CA+ E D PI+ + ++L QA Q S + + D+ ++ N V S+ ++ T N W F+K F IQLAL F F+L + +P + A++TGK+ F+ D + DA G ++ N PVPFRLT N+ F Sbjct: 3461 IEEKCRFLSNFSAQTAEVEIPGEFLMPK---PTHYYIKIARFMPRVEIVQKHNTAARRLYIRGHNGKIYPYLVMNDACLTESRREERVLQLLRLLNPCLEKRKETTKRHLFFTVPRVVAVSPQMRLVEDNPSSLSLVEIYKQRCAKKGIEHDNPISRYYDRLATVQARGTQASHQVLRDI----LKEVQSNMVPRSMLKEWALHTFPNATDYWTFRKMFTIQLALIGFAEFVLHLNRLNPEMLQIAQDTGKLNVAYFRFDIN---DATGDLDANRPVPFRLTPNISEF 3738
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRA1_YEAST (Transcription-associated protein 1 OS=Saccharomyces cerevisiae GN=TRA1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.353e-35 Identity = 92/291 (31.62%), Postives = 146/291 (50.17%), Query Frame = 1 Query: 34 LRDFH---VVDVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAISGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPA---YDA---------------NGMIEFNEPVPFRLTRNMQS 843 L +FH D+EIPGQY +++ H +K+ R + VR SS+RRL + G DGS F VQ ++R +ER+ QL+R+ N+ K+ E RRR I + PI IP+ QVR++ D + ++T E++ C + + D + ++LN A + + L+++ +N I V ++ W F+KQFA Q + FMS+M+ I R+P+KI K +G +F + P+ Y+ + + NEPVPFRLT N+QS Sbjct: 3341 LSNFHHQKFEDIEIPGQYLLNKDNNV-HFIKIARFLPTVDFVRGTHSSYRRLMIRGHDGSVHSFAVQYPAVRHSRREERMFQLYRLFNKSLSKNVETRRRSIQFNLPIAIPLSPQVRIMNDSVSFTTLHEIHNEFCKKKGFDPDDIQDFMADKLNAAHDDALPAPDMTILKVEIFNSIQTMFVPSNVLKDHFTSLFTQFEDFWLFRKQFASQYSSFVFMSYMMMINNRTPHKIHVDKTSGNVFTLEMLPSRFPYERVKPLLKNHDLSLPPDSPIFHNNEPVPFRLTPNIQS 3630
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: YAMB_SCHPO (Uncharacterized PI3/PI4-kinase family protein C1F5.11c OS=Schizosaccharomyces pombe GN=SPAC1F5.11c PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 90/300 (30.00%), Postives = 142/300 (47.33%), Query Frame = 1 Query: 7 LKLEEESRVLRDFH---VVDVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAI------------------SGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFN-EPVPFRLTRNMQ 840 L LE+ S L +F +VEIPGQY D+ D V+L+R ++ +VR H ++RLTL G DG F +Q T ++R +ER+LQL N + E + R+ P IP+ S +R++ D Y T + + +C D I ++ ++L + QI + + LR+Q + + ESI+ + YKT W F++ F Q A M+++ IGGRSP K+ K++G++ D P+ +N + N E VPFRLT +Q Sbjct: 3242 LHLEQCSLYLSEFQHQKFDEVEIPGQYLLDKNNNNDF-VRLERFVPNVDLVRGHTMCYKRLTLRGYDGKLYPFALQYPATRHSRREERMLQLLGTFNTVLRSKIEIQNRNFSFQIPSSIPLSSHMRIIADKPSYVTMQTISDEYCKNRGMPLDYGIRFYFDRLQTGLIQLKRASASMLSNSTVEEKKQIFRQRALQLRMQLLETLNSSVFPESIYYDYFYKTFERYCDFWFFRRTFTTQYAYMIIMTYVFNIGGRSPQKLFIVKDSGQVMSQDLLPSMTSNQPVFHNTEAVPFRLTPPIQ 3540
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRA1_SCHPO (Transcription-associated protein 1 OS=Schizosaccharomyces pombe GN=tra1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.186e-31 Identity = 83/296 (28.04%), Postives = 156/296 (52.70%), Query Frame = 1 Query: 13 LEEESRVLRDFH---VVDVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQ---AISGQISPEA-----------VVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFN-EPVPFRLTRNMQSF 846 LE+ S L +FH ++E+PGQY ++ + ++R ++ ++ HG +RRL++ + G+ F++Q N+R +ER +QL R +N + E RRR + + P +IP+ S +R++ED T ++YE + RN+ D P F +L++ ++ QIS E+ + R+ + +I K + +I + N + +W F+K F+ Q A SF++++L I R P K++F++++G ++ T+ P+ ++ + N E VPFR T N++ F Sbjct: 3292 LEQYSSFLCEFHHQKFDEIEVPGQYLLHKDNNNSFSC-IERFLPEVELIVGHGVCYRRLSIRSNGGTIHPFVIQYPSARNSRREERFMQLTRYLNDALALNCETRRRCLKFYIPAVIPLSSHIRLLEDQPSSITLQKIYEIYSERNNFSRDDPKELFTNELSKHMMELNSQISQESTDAEKLANRKQLFSRRIGMFENIQKLYSPSTILKDYFSSIFTNYSDLWLFRKNFSYQYACFSFITYILSINNRIPAKLVFSRDSGGVWTTEALPSMVSSTPVYHNGEIVPFRFTPNIKEF 3586
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRA1_DROME (Transcription-associated protein 1 OS=Drosophila melanogaster GN=Nipped-A PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.552e-23 Identity = 75/284 (26.41%), Postives = 149/284 (52.46%), Query Frame = 1 Query: 13 LEEESRVLRDFH--VVDVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGS-QRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAISGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANG---MIEFNEPVPFRLTRNMQSF 846 +E++ R L +F +VE+PG+ ++ + V++ R + IV+++ ++ RRL + G++G + +V S +AR +ER+LQL R++N +K KE RR + I P ++P+ Q+R+ ED+ + L++++ C + D PI + ++L++ + + +P LR + +++I V +++ + KT L W F+K +QLAL+ L + + + + +++G + + F +D N + + PVPFRLT N+ F Sbjct: 3403 IEDKCRFLSNFSQKTAEVELPGELLIP--LSSHYYVRIARFMPRVEIVQKNNTAARRLYIRGTNGKIYPYLVVLDSGLGDARREERVLQLKRMLNYYLEKQKETSRRFLNITVPRVVPISPQMRLAEDNPNSISLLKIFKKCCQSMQVDYDMPIVKYYDRLSE-VQARGTPTTHTLLR-EIFSEIQWTMVPKTLLKHWALKTFLAATDFWHFRKMLTLQLALAFLCEHALNLTRLNADMMYLHQDSGLMNISYF--KFDVNDDKCQLNQHRPVPFRLTPNVGEF 3680
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: TRA1_DICDI (Probable transcription-associated protein 1 OS=Dictyostelium discoideum GN=tra1 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13 Identity = 72/306 (23.53%), Postives = 141/306 (46.08%), Query Frame = 1 Query: 13 LEEESRVLRDFHVVDVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRR-HGSSFRRLTLIGSDGSQRHFIVQTS------LTPN-----ARSDERILQLFRVMNQMFDKHKEARRRHICIHT-PIIIPVWSQVRMVED--DLMYSTFLEVYENHC--------------------------ARNDREADQPITYFKEQLNQAISGQISPEA---------VVDL-RLQAYNDITKNHVSESIFSQFMYKTLLNGNHM--WAFKKQFAIQLALSSFMSFML--QIGGRSPNKILFAKNTGKIFQTDF 765 LE L +F +EIPGQY ++++ ++ VK+++VG +++ +G R+TL G +G F++++S +T + AR ER QL +N M K++E RRR + +++ P ++P+ + + M+++ + EV+ H ++ D++ D T E N + S S + ++D +L + +++K + + + ++ TLL N+ + FK F+ Q L S + ++L IG P+KI K+TG ++ D+ Sbjct: 4119 LESICPQLVNFKPSILEIPGQYNTNRDPNIENNVKVEKVGMFAKLIKHSNGMVCPRITLYGGNGKAYQFLIESSPSLINGITNSNNNNVARVYERKNQLLGSINSMLIKNRETRRRGLTLNSYPTVVPIKNSLTMIQNIGNDSIKQLAEVWYTHSNQSNLFKPMLKYKEMLLNSNLHTELLSKKDQDGDLEFTNITEDNNISSSSSSSSSSGSNSGENSPIIDSSKLVVFREMSKE-IGDELMINYIQSTLLPTNYQDQYEFKLNFSNQFGLHSLLQYILFSDIGDIDPSKIYLTKSTGSVYYNDW 4423
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: PRKDC_MOUSE (DNA-dependent protein kinase catalytic subunit OS=Mus musculus GN=Prkdc PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13 Identity = 68/279 (24.37%), Postives = 124/279 (44.44%), Query Frame = 1 Query: 55 DVEIPGQYFSDQEVAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVE--------DDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAISGQISPEAVVDLRLQAYNDIT-------KNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAY-DANGMIEFNEPVPFRLTRNMQS 843 ++EIPGQY + P++ V++ + ++ +R+ + G D + F+V+ + R D+RI Q+F VMN + + +R++ + T ++P+ S++ ++E DL+ S + + N+ + PI +K+ L +SG+ A V + +A T ++ V + + K + A + FA AL ++L IG R N + A TG + DF A+ A + E +PFRLTR S Sbjct: 3698 ELEIPGQYDGKSKPLPEYHVRISGFDERVKVMLSLRKP-KRIVIRGHDEKEYPFLVKGG--EDLRQDQRIEQIFEVMNAILSQDAACSQRNMQLRTYRVVPMTSRLGLIEWIENTMTLKDLLLS---NMSQEEKVANNSDPKAPIRDYKDWL-MKVSGKSDAGAYVLMYSRANRTETVVAFRRRESQVPPDLLKRAFVKMSTSPEAFLALRSHFASSHALLCISHWLLGIGDRHLNNFMVAMETGSVIGIDFGHAFGSATQFLPVPELMPFRLTRQFVS 3969
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: ATM_CANGA (Serine/threonine-protein kinase TEL1 OS=Candida glabrata GN=TEL1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 64/245 (26.12%), Postives = 117/245 (47.76%), Query Frame = 1 Query: 103 DHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAISGQISPEAVVDLRLQAYNDITKNHVSESIFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFNEPVPFRLTRNM 837 D + + +V +I I S + +TL+ SDGS RH +V + + R D + Q+F+ +N++F K E RR + + T ++P+ + ++E + L + H D D ++ + + + S + R+ Y DITK + F F + + ++ N K+++ +A SS + ++L +G R N IL TG+ D A+D +++ E VPFRLTR++ Sbjct: 2394 DSSRNIVKVIGNITITSTGLSLPKVMTLLLSDGS-RHKVVIKYGSDDLRQDAIMEQVFQQVNKIFGKDVEMRRSDLHMRTYNVVPLGPKAGLIE---FVNNSLSL---HSILTDIHKDDNYSWLEARRSMKDVQSKSDKE----RILTYLDITKKISPK--FRNFFFNSFIDANGWICAKRKYTKGVATSSMVGYILGLGDRHLNNILIDTTTGEPIHIDLGIAFDQGRLLKIPELVPFRLTRDI 2625
BLAST of FC872799 vs. ExPASy Swiss-Prot
Match: RAD3_SCHPO (Protein kinase rad3 OS=Schizosaccharomyces pombe GN=rad3 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 56/227 (24.67%), Postives = 112/227 (49.34%), Query Frame = 1 Query: 172 RRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKEARRRHICIHTPIIIPVWSQVRMVEDDLMYSTFLEVYENHCARNDREADQPITYFKEQLNQAISGQISPEAVVDLRLQAYN--DITKNHVSES---IFSQFMYKTLLNGNHMWAFKKQFAIQLALSSFMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFNEPVPFRLTRNM 837 R++ + G+DG+ F+ + + R D R+++ ++ ++ K +EA RR++CI T ++IP+ + +E F E+ ++ R+ + PI+Y + +++ +D L++ N DI + + +F ++ ++ N+ ++ + LA+ S + ++L +G R ILF + TG+ DF+ +D E E VPFRLT NM Sbjct: 2066 RKVYVRGTDGNLYPFLCKPK--DDLRKDARLMEFNNLICKILRKDQEANRRNLCIRTYVVIPLNEECGFIEWVNHTRPFREIL----LKSYRQKNIPISYQEIKVD------------LDFALRSPNPGDIFEKKILPKFPPVFYEWFVESFPEPNNWVTSRQNYCRTLAVMSIVGYVLGLGDRHGENILFDEFTGEAIHVDFNCLFDKGLTFEKPEKVPFRLTHNM 2274 The following BLAST results are available for this feature:
BLAST of FC872799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872799 ID=FC872799; Name=FC872799; organism=Citrus clementina; type=EST; length=847bpback to top |