FC872802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872802 vs. ExPASy Swiss-Prot
Match: GIGAN_ARATH (Protein GIGANTEA OS=Arabidopsis thaliana GN=GI PE=1 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 6.303e-90 Identity = 164/220 (74.55%), Postives = 188/220 (85.45%), Query Frame = 2 Query: 5 ASPTKAATAVVLQAERELQPWIAKDDDQGQKMWRINQRIVKLIVELMRIYDSPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPILRWGKSGLAIADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDFLHTSSF----KSNIEQVERNGIHGSSLHYFNIDAINWQSDIEKCLTWEAHSRLATGMPIQFLDIAAKELGCTISI 652 A+P KAA AVVLQAERELQPWIAKDD++GQKMW+INQRIVK++VELMR +D PESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQP+L WG SGLA+ DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRD ++ SS + E+NG++ S +FN +I+W++DI+ CL WEAHS L+T MP QFLD AA+ELGCTIS+ Sbjct: 952 ATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVLVELMRNHDRPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSSIPIKVTPKLPTTEKNGMNSPSYRFFNAASIDWKADIQNCLNWEAHSLLSTTMPTQFLDTAARELGCTISL 1171
BLAST of FC872802 vs. ExPASy Swiss-Prot
Match: GIGAN_ORYSJ (Protein GIGANTEA OS=Oryza sativa subsp. japonica GN=GI PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 9.747e-83 Identity = 151/217 (69.59%), Postives = 178/217 (82.03%), Query Frame = 2 Query: 5 ASPTKAATAVVLQAERELQPWIAKDDDQGQKMWRINQRIVKLIVELMRIYDSPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPILRWGKSGLAIADGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDFLHTSSFKSN--IEQVERNGIHGSSLHYFNIDAINWQSDIEKCLTWEAHSRLATGMPIQFLDIAAKELGCTIS 649 ASPTKA+ A+VLQAE++LQPWIA+DD+QGQKMWR+NQRIVKLI ELMR +DSPE+LVILASASDLLLRATDGMLVDGEACTLPQLELLE TARA+ I+ WG SG+++ADGLSNLLKCRL TIRCLSHPSAHVRALS SVLRD L++ S+ I+ RNGI + INWQ+D+E+C+ WEAHSR ATG+ + FL AAKELGC ++ Sbjct: 943 ASPTKASAAIVLQAEKDLQPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALVILASASDLLLRATDGMLVDGEACTLPQLELLEVTARAVHLIVEWGDSGVSVADGLSNLLKCRLSTTIRCLSHPSAHVRALSMSVLRDILNSGQINSSKLIQGEHRNGIQSPTYQCLAASIINWQADVERCIEWEAHSRRATGLTLAFLTAAAKELGCPLT 1159 The following BLAST results are available for this feature:
BLAST of FC872802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872802 ID=FC872802; Name=FC872802; organism=Citrus clementina; type=EST; length=769bpback to top |