FC872812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872812 vs. ExPASy Swiss-Prot
Match: LEC1_MEDTR (Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.855e-13 Identity = 56/190 (29.47%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 78 AAKIRVGRV*YSQPVTAWP------AMIKTTFTIRIS-PYSNTTDSADGMTFVFATNTTPPTDXXXXXXXXXXXXXXXX------TMELDPYKNDYCSDPDAN-HMGIDIANLTSNPSKSLNSSGIDLKSGRPIHVQIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSE 605 A K +GR YS P+ W A +T FT I+ PYS+ ADG+ F A T P + +E+D + N + DP N H+GI++ N KS++++ L++GR +V + +D T +L V ++Y G P ++ + L + +P V +GF+A+TG +F+E Sbjct: 67 AVKNSIGRALYSAPIHIWDSKTGDVANFETLFTFAITAPYSSNV--ADGLAFFIAPVDTQPQNIGRAGFLGVFNSETYNKSIQTVAVEIDTFHNTW--DPKINRHIGINV-----NCIKSISTTSWVLENGREANVLVRFDAHTNVLSVVLSYPGLPDSYILSDVVPLKDIVPEWVRIGFSAATGAEFAE 247
BLAST of FC872812 vs. ExPASy Swiss-Prot
Match: LECS_VATMA (Seed lectin OS=Vatairea macrocarpa PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11 Identity = 56/198 (28.28%), Postives = 88/198 (44.44%), Query Frame = 3 Query: 93 VGRV*YSQPVTAWP------AMIKTTFTIRISPYSNTTDSADGMTFVFATNTTPPTDXXXXXXXXXXXXXXXXTM--ELDPYKNDYCSDPDANHMGIDIANLTSNPSKSLNSSGIDLKSGRPIHVQIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSETHHVLDCTFT-TFPLPS 653 +GR Y+ P+ W A T+F+ + + + +ADG+ F A T P T+ E D + N + DP A H+GI++ N +S+ ++G+ +V I Y+ TK L + Y N ++ + L +P V VGF+A++G D ETH VLD +FT T PS Sbjct: 47 LGRALYAAPIHIWDDSTDRVASFATSFSFVVEA-PDESKTADGIAFFLAPPDTQPQKDGGFLGLFNDSNKSIQTVAVEFDTFSNTW--DPSARHIGINV-----NSIESMKYVKWGWENGKVANVYISYEASTKTLTASLTYPSNATSYIVSANVDLKSALPEWVRVGFSATSGLSRDHVETHDVLDWSFTSTLQAPS 236 The following BLAST results are available for this feature:
BLAST of FC872812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872812 ID=FC872812; Name=FC872812; organism=Citrus clementina; type=EST; length=755bpback to top |