FC872820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872820 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 277 LEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLRITDEVRDLKILSIVMI 702 LE T PL T VP++++FHGG+F SS+ Y T LV ++VVSV+YR +PEH P A++D AL WV S WLQ D + V+LAGD++G +IAH + +R T+E +K+L +++ Sbjct: 94 LELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS-----------------RVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNE--GVKVLGNILL 217
BLAST of FC872820 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 277 LEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLQEFVDFDKVFLAGDNAGSSIAHYLGLRITDE 666 LEF P++++FHGG+FV SS++ Y + V + +VVSVNYR APEH P A++D ALKWV S G+ +VFL+GD++G +IAH++ +R DE Sbjct: 101 LEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQA----------------RVFLSGDSSGGNIAHHVAVRAADE 214
BLAST of FC872820 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 271 SQLEFTVPLDFTNKVPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLR 654 S L+ P+D + VP++++FHGG+F SS+ Y T LV +VVSVNYR APE+P P A++D AL WV N +WL+ D +FLAGD++G +IAH + LR Sbjct: 93 SILDLEKPVD-GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWV-----------------NSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALR 203
BLAST of FC872820 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 313 VPLVVYFHGGAFVISSSAYPKYHTTLNNLVAEADIIVVSVNYRLAPEHPLPAAFEDSLGALKWVASHAKGEGDGNRPLPVLNQEAWLQEFVDFD-KVFLAGDNAGSSIAHYLGLRITDEVRDL 678 VP++V+FHGG+F SS+ Y T LV +VVSVNYR APE+ P A++D LKWV N +WL+ D ++FLAGD++G +I H + +R + D+ Sbjct: 104 VPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV-----------------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDV 209 The following BLAST results are available for this feature:
BLAST of FC872820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872820 ID=FC872820; Name=FC872820; organism=Citrus clementina; type=EST; length=703bpback to top |