FC872832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 1.390e-49 Identity = 115/222 (51.80%), Postives = 153/222 (68.92%), Query Frame = 2 Query: 134 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRN---TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGNLGWFDYEDLLYLLQQN-YISAAEWLLLH 787 N+ V+D NM +SQ YP DV T IV GE +PKRR++K + +GG +KRKLT EQ +LEM FG+EHKLES+RKD+LAAELGLDPRQVAVWFQNRRAR K K++EE Y LK +H+NVVV+K RLESEV LKE+L AE+EI++++E +EG S N+P ++ ++ ++PF D G+ G DY+ L Y + +N YI AEW+ L+ Sbjct: 2 NYTVDDQ--NMAFISQLYP-DVYTQ--IVQPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETPFFGDYKVGDDG-DDYDHLFYPVPENSYIDEAEWMSLY 216
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.999e-44 Identity = 107/225 (47.56%), Postives = 150/225 (66.67%), Query Frame = 2 Query: 134 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTN----------GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGNLGWFDYEDLLYLLQQNYISAAEWL 778 N V+D+ N++L+SQ YP+ V TP +VPQQG +KP RR+++++ + GNG FR KRKL+ EQ +LE+ F ++HKLES+RKD+LA+ELGLDPRQVAVWFQNRRAR K K++E+ Y LK A+E VVEK RL+SEV LKE+L AE+EI+++++ +EG N+P ++ T +PF D G G D E+LLY +YI +W+ Sbjct: 3 NQNVDDH--NLLLISQLYPN-VYTP--LVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGNGWFR---KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANHTTPFFGDYDIGFDGEAD-ENLLY--SPDYIDGLDWM 216
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.820e-41 Identity = 98/218 (44.95%), Postives = 133/218 (61.01%), Query Frame = 2 Query: 164 MVLLSQFYPSDVLTPTG--IVPQQ---GEPSKPKRRQRKRNTNGNGGFRA---------LKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGNLGWFDYEDLLYLLQQNYISAAEW 775 M+L SQ YP I+ Q GE SKP +R+RKR + G+ L+KRKLT EQ +LE FGNEHKLES RK+K+A ELGLDPRQVAVWFQNRRAR K KK+EE YA LK H+NVV+ + +LES++ L E+LS A+ EI+K+SE +E + N+ S+++ + + + F L P +Y Y+L NY+ + E+ Sbjct: 11 MMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVEANNAPTDFELAPET------NYNIPFYMLDNNYLQSMEY 222
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.560e-29 Identity = 88/238 (36.97%), Postives = 131/238 (55.04%), Query Frame = 2 Query: 149 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM-----SELIEG-----ISLNNPSATIPTDMDTVDSPFTLDP--FAGNLGWFDY---EDLLYLLQQNYI---SAAEWLLLH 787 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ S G + L A + + S T P F G G D+ +DL+Y+ + S EW L+ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPSSSFSTGTCQPPSFGGGGGGGDHLGDDDLVYVPEYGGYADNSVVEWFSLY 241
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29 Identity = 70/158 (44.30%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 149 DNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRK--RNTNGNGGFRAL-----KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 601 + + + + + + +L +G V QGE + +RR+R+ R G GG + KKR+L+ EQ E+LE+ F E KLE+ RK LA+ELGLDP+QVAVWFQNRRAR K+K +EE ++ LK AH+ ++ K LE+EV LKE+L VAE+E++++ Sbjct: 6 EKQQQQQMFASYVDASLLAASGEV--QGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.811e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 230 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 604 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.811e-26 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 230 GEPSKPKRRQRKRN--------TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMS 604 GE K ++R+R++ +GG KKR+L+ EQA LEM F E KLE+ RK +LAAELGLD +QVAVWFQNRRAR K+K +EE +A L++AH+ VV++ LE+E+ LKE+L+ E+E K++ Sbjct: 29 GEQKKARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLADVEEEKAKLA 161
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HAT5_ARATH (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20 Identity = 63/152 (41.45%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGNLGWFDYEDLL 736 KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E Y LK+ ++++V++ +L SEV +L EKL ++ + N P +P P LDP N ED L Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQE------------TANEPPGQVP-------EPNQLDPVYINAAAIKTEDRL 200
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19 Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSP 679 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL E + SATI T VD P Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE--------------TSPSSATITTAAQEVDQP 204
BLAST of FC872832 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19 Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 2 Query: 302 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSP 679 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL E + SATI T VD P Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKE--------------TSPSSATITTAAQEVDQP 204 The following BLAST results are available for this feature:
BLAST of FC872832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872832 ID=FC872832; Name=FC872832; organism=Citrus clementina; type=EST; length=898bpback to top |