FC872954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.345e-54 Identity = 116/240 (48.33%), Postives = 158/240 (65.83%), Query Frame = 2 Query: 83 GDEINLNSIKTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLG-NSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQ-----HLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQR 784 G ++ + +EP G++F++ E A+ FY+EYAKS+GF T IK SRRS+ + FIDAKF C+RYG ES + S+ +R + KTDCKA MHVKRR DG+WII F+K+HNHE+ P AY+FR RN+ L +N D LHA+ ERTK+M+V MSR+SGG+K + GS++ VS+Q +LALEEGD+QV+L++F ++ ENP FFYAIDLNE+QR Sbjct: 38 GGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSS--------------SRRSTV----KKTDCKASMHVKRR-PDGKWIIHEFVKDHNHELLPALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNI----GSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQR 254
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.190e-51 Identity = 118/219 (53.88%), Postives = 142/219 (64.84%), Query Frame = 2 Query: 128 EGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRES-STVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQ 781 EG EFESKEEAF FYKEYA SVGF TIIKASRRSR++GKFIDAKFVCTRYG+K+E T T+ N IP +KRGRINRS SKTDCKA +HVKRRQ DGRW++RS +KEHNHEIF QA D+L R+ G +KL+ G++V + S + LE+GD + +L+ F MQ ENP FFY+IDL+EEQ Sbjct: 23 EGREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFN------IPQARKRGRINRSSSKTDCKAFLHVKRRQ-DGRWVVRSLVKEHNHEIFTGQA----------------DSL---------------RELSGRRKLEKLNGAIVKEVKSRK---LEDGDVERLLNFFTDMQVENPFFFYSIDLSEEQ 200
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.919e-43 Identity = 95/215 (44.19%), Postives = 129/215 (60.00%), Query Frame = 2 Query: 134 MEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEE 778 MEFE+ E+A+ FYK+YAKSVGF T +SRRSR S +FIDAKF C RYG+K++S + IN R+ K CKA MHVKRR DG+W + SF+KEHNH++ P+QA+YFR HRN +L SN L R K +T + + LD G + N + L L+ GDA+++L+ M MQ+ENP FF+A+D +E+ Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSD-----DAIN----------------PRASPKIGCKASMHVKRR-PDGKWYVYSFVKEHNHDLLPEQAHYFRSHRNTELVKSNDSRL----RRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQEENPKFFFAVDFSED 189
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.105e-40 Identity = 90/234 (38.46%), Postives = 134/234 (57.26%), Query Frame = 2 Query: 83 GDEINLNSIKTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQR 784 G+ + +EPL GMEFES EA+SFY+EY++++GF T I+ SRRS+ + +FIDAKF C+RYG KRE + + GR R+ +KTDCKA MHVKRR DG+W+I SF++EHNHE+ P Q A+ E+T++++ M+++ +K + K + + L++E GD +++LD MQ N NFFYA+DL ++QR Sbjct: 57 GELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDP---ENMAGR--RTCAKTDCKASMHVKRR-PDGKWVIHSFVREHNHELLPAQ---------------------AVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQR 263
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.478e-35 Identity = 92/231 (39.83%), Postives = 121/231 (52.38%), Query Frame = 2 Query: 95 NLNSIKTIEPLE-GMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQR 784 N+ T+ L GM+FESKE A+ FY+EYA+SVGF IKASRRS+ SGKFID K C+R+G KRE +T IN RS KT CKA +H+KR+ ED +W+I +F+KEHNHEI PD Y G + P AI++ LALEE D +++L+HFM MQD+ P FFYA+D + ++R Sbjct: 28 NVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKAT-----AIN----------------PRSCPKTGCKAGLHMKRK-EDEKWVIYNFVKEHNHEICPDDFYV------SVRGKNKPAGALAIKK--------------------------------GLQLALEEEDLKLLLEHFMEMQDKQPGFFYAVDFDSDKR 198
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.184e-29 Identity = 74/226 (32.74%), Postives = 124/226 (54.87%), Query Frame = 2 Query: 116 IEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYG--NKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIF-PDQAYYFRGHRNLD-LGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQ 781 +EP +G+EFES+E A +FY YA+ +GF+T + +SRRSR G I +FVC + G N E T K + + R+ ++ CKA + VK Q+ G+W++ F+K+HNHE+ PDQ + R HR + + D L A +R+ + ++ GG K+ + N++ + + ++ EG+ Q++LD+ M +NPNFFY++ +E+Q Sbjct: 71 LEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRT-----------------KDREIKRPRTITRVGCKASLSVK-MQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSI-EGEIQLLLDYLRQMNADNPNFFYSVQGSEDQ 277
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 60/222 (27.03%), Postives = 91/222 (40.99%), Query Frame = 2 Query: 110 KTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLD-HQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLN 772 K EP G+EF S EA FY+ YA+ VGF I RS++ G +FVC++ G + S+ C A M +K RQ+ G WI+ K+HNH++ P G +N + D +GG +D + + NH+ S + + + V+LD+F Q E+ FFYAI+L+ Sbjct: 186 KATEPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHP-------------------------------SRMGCGAYMRIK-RQDSGGWIVDRLNKDHNHDLEP-------GKKNAGMKKITDDV------------------TGGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELD 350
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.194e-13 Identity = 59/228 (25.88%), Postives = 99/228 (43.42%), Query Frame = 2 Query: 122 PLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNS-----NPDALHAIRERTKRMFVTMSRKS----GGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEE 778 P GMEFES ++A+SFY YA+ +GFA +K+S R S + A C G K K R ++T C+A + ++ D RW + +HNH P +A+ + H+ S NP+ ++ RT +++ T++ + G ++H S++ L L G + + D F +Q +PNF Y +DL ++ Sbjct: 66 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFK----------------------LLKDAHSRRKETRTGCQAMIRLRLIHFD-RWKVDQVKLDHNHSFDPQRAHNSKSHKKSSSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLEL-RGGFRALQDFFFQIQLSSPNFLYLMDLADD 269
BLAST of FC872954 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12 Identity = 57/228 (25.00%), Postives = 98/228 (42.98%), Query Frame = 2 Query: 101 NSIKTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFYAIDLNEEQR 784 + I EP GMEF S++EA SFY EY++ +GF + + R G +FVC+ SS+ K+ + R++ S C A + ++ + + +W++ F+KEH H + + R + + + M+V+M S G + N ++ DA +L++F MQ ENP FFYA+ L+E+ + Sbjct: 42 DEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKLLP----RTDGSVSVREFVCS-------SSS-----------------KRSKRRLSES-----CDAMVRIELQGHE-KWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEKSSYQEGVNVPSGMMYVSMDANSRGAR----------NASMATNTKRTIGRDAHNLLEYFKRMQAENPGFFYAVQLDEDNQ 225 The following BLAST results are available for this feature:
BLAST of FC872954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872954 ID=FC872954; Name=FC872954; organism=Citrus clementina; type=EST; length=786bpback to top |