FC872963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.803e-49 Identity = 108/231 (46.75%), Postives = 149/231 (64.50%), Query Frame = 2 Query: 83 GDEINLNSIKTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLG-NSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQ-----HLALEEGDAQVMLDHFMHMQDENPNFFY 757 G ++ + +EP G++F++ E A+ FY+EYAKS+GF T IK SRRS+ + FIDAKF C+RYG ES + S+ +R + KTDCKA MHVKRR DG+WII F+K+HNHE+ P AY+FR RN+ L +N D LHA+ ERTK+M+V MSR+SGG+K + GS++ VS+Q +LALEEGD+QV+L++F ++ ENP FFY Sbjct: 38 GGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSS--------------SRRSTV----KKTDCKASMHVKRR-PDGKWIIHEFVKDHNHELLPALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQSGGYKNI----GSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFY 245
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.441e-48 Identity = 112/211 (53.08%), Postives = 134/211 (63.51%), Query Frame = 2 Query: 128 EGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRES-STVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 EG EFESKEEAF FYKEYA SVGF TIIKASRRSR++GKFIDAKFVCTRYG+K+E T T+ N IP +KRGRINRS SKTDCKA +HVKRRQ DGRW++RS +KEHNHEIF QA D+L R+ G +KL+ G++V + S + LE+GD + +L+ F MQ ENP FFY Sbjct: 23 EGREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFN------IPQARKRGRINRSSSKTDCKAFLHVKRRQ-DGRWVVRSLVKEHNHEIFTGQA----------------DSL---------------RELSGRRKLEKLNGAIVKEVKSRK---LEDGDVERLLNFFTDMQVENPFFFY 192
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.530e-40 Identity = 92/208 (44.23%), Postives = 123/208 (59.13%), Query Frame = 2 Query: 134 MEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 MEFE+ E+A+ FYK+YAKSVGF T +SRRSR S +FIDAKF C RYG+K++S + IN R+ K CKA MHVKRR DG+W + SF+KEHNH++ P+QA+YFR HRN +L SN L R K +T + + LD G + N + L L+ GDA+++L+ M MQ+ENP FF+ Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSD-----DAIN----------------PRASPKIGCKASMHVKRR-PDGKWYVYSFVKEHNHDLLPEQAHYFRSHRNTELVKSNDSRL----RRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQEENPKFFF 182
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.858e-37 Identity = 85/225 (37.78%), Postives = 126/225 (56.00%), Query Frame = 2 Query: 83 GDEINLNSIKTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 G+ + +EPL GMEFES EA+SFY+EY++++GF T I+ SRRS+ + +FIDAKF C+RYG KRE + + GR R+ +KTDCKA MHVKRR DG+W+I SF++EHNHE+ P Q A+ E+T++++ M+++ +K + K + + L++E GD +++LD MQ N NFFY Sbjct: 57 GELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDP---ENMAGR--RTCAKTDCKASMHVKRR-PDGKWVIHSFVREHNHELLPAQ---------------------AVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFY 254
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.174e-32 Identity = 89/222 (40.09%), Postives = 114/222 (51.35%), Query Frame = 2 Query: 95 NLNSIKTIEPLE-GMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 N+ T+ L GM+FESKE A+ FY+EYA+SVGF IKASRRS+ SGKFID K C+R+G KRE +T IN RS KT CKA +H+KR+ ED +W+I +F+KEHNHEI PD Y G + P AI++ LALEE D +++L+HFM MQD+ P FFY Sbjct: 28 NVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKAT-----AIN----------------PRSCPKTGCKAGLHMKRK-EDEKWVIYNFVKEHNHEICPDDFYV------SVRGKNKPAGALAIKK--------------------------------GLQLALEEEDLKLLLEHFMEMQDKQPGFFY 189
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.668e-28 Identity = 72/218 (33.03%), Postives = 118/218 (54.13%), Query Frame = 2 Query: 116 IEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYG--NKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIF-PDQAYYFRGHRNLD-LGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 +EP +G+EFES+E A +FY YA+ +GF+T + +SRRSR G I +FVC + G N E T K + + R+ ++ CKA + VK Q+ G+W++ F+K+HNHE+ PDQ + R HR + + D L A +R+ + ++ GG K+ + N++ + + ++ EG+ Q++LD+ M +NPNFFY Sbjct: 71 LEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRT-----------------KDREIKRPRTITRVGCKASLSVK-MQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSI-EGEIQLLLDYLRQMNADNPNFFY 269
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 57/217 (26.27%), Postives = 86/217 (39.63%), Query Frame = 2 Query: 110 KTIEPLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNSNPDALHAIRERTKRMFVTMSRKSGGHKKLD-HQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 K EP G+EF S EA FY+ YA+ VGF I RS++ G +FVC++ G + S+ C A M +K RQ+ G WI+ K+HNH++ P G +N + D +GG +D + + NH+ S + + + V+LD+F Q E+ FFY Sbjct: 186 KATEPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHP-------------------------------SRMGCGAYMRIK-RQDSGGWIVDRLNKDHNHDLEP-------GKKNAGMKKITDDV------------------TGGLDSVDLIELNDLSNHISSTRENTIGKEWYPVLLDYFQSKQAEDMGFFY 345
BLAST of FC872963 vs. ExPASy Swiss-Prot
Match: FRS8_ARATH (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12 Identity = 57/221 (25.79%), Postives = 94/221 (42.53%), Query Frame = 2 Query: 122 PLEGMEFESKEEAFSFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGNKRESSTVESTEVINMDSMTGIPIKKKRGRINRSWSKTDCKACMHVKRRQEDGRWIIRSFIKEHNHEIFPDQAYYFRGHRNLDLGNS-----NPDALHAIRERTKRMFVTMSRKS----GGHKKLDHQKGSVVNHLVSAQHLALEEGDAQVMLDHFMHMQDENPNFFY 757 P GMEFES ++A+SFY YA+ +GFA +K+S R S + A C G K K R ++T C+A + ++ D RW + +HNH P +A+ + H+ S NP+ ++ RT +++ T++ + G ++H S++ L L G + + D F +Q +PNF Y Sbjct: 66 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFK----------------------LLKDAHSRRKETRTGCQAMIRLRLIHFD-RWKVDQVKLDHNHSFDPQRAHNSKSHKKSSSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLEL-RGGFRALQDFFFQIQLSSPNFLY 262 The following BLAST results are available for this feature:
BLAST of FC872963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872963 ID=FC872963; Name=FC872963; organism=Citrus clementina; type=EST; length=759bpback to top |