FC872980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.497e-77 Identity = 133/273 (48.72%), Postives = 193/273 (70.70%), Query Frame = 3 Query: 3 NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEIEILSTE 812 +GVEI K+W + +E+ +R+KIDTLS++NHKNFVNLIG+CEE++PF RMMVFEYAPNGTLFEH+H KE+EHLDW R+RI MG AYCL+HMH +NPP+AH NSS ++LT+DYAAK+S++ F E + + NV++FGVL+ E+++G+L + + GS+E WA+ YL L + +DP+L +F EE+LE + ++I+ C++ + +RP+M+D+A L+++ ITP+ A P+ SPLWWAE+EILS+E Sbjct: 405 SGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHGMNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQTSLLLPPEPEANVHSFGVLMLEIISGKLSFSDEYGSIEQWASKYLE-KDDLGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINITPEKATPRSSPLWWAELEILSSE 676
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.857e-73 Identity = 129/273 (47.25%), Postives = 186/273 (68.13%), Query Frame = 3 Query: 3 NGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA---MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEIEILSTE 812 +GVEI ++W + +E+ +R++IDT+S+VNHKNF+NLIG+CEE+EPF RMMVFEYAPNGTLFEH+H KE EHLDW R RI MG AYCL++MH+LNPPI+H L SSA++LT+DYAAK+ ++ F + M NVY+FGVL+ E+++G+L + GS+ WA+ YL L+ +DPTL+++ EE+LE + ++ + C++ D +RP M+ + L+E+ I+ + A P+LSPLWWAE+EILS+E Sbjct: 422 SGVEIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKEMEHLDWNARTRIIMGTAYCLQYMHELNPPISHTKLVSSAIYLTDDYAAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPEPETNVYSFGVLMLEIISGKLSDSEEEGSILKWASKYLEN-DNLRDMIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVVQQLKEVINISQEQATPRLSPLWWAELEILSSE 693
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.359e-43 Identity = 90/269 (33.46%), Postives = 150/269 (55.76%), Query Frame = 3 Query: 48 KDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADP------EKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEIEI 800 +DW LE+ F++++ L+++NH+N L+G+C+E PFTRM+VFEYA NGTL+EH+H E+ + W R++I +G+A L+++H +L+PP + L+S+A++LTED+ KL D W I+ N+Y FG+LL E+V+GR PY D G L +WA ++L + + VDP L F++E LE + E+ C+ DP +P+++++ L ++ + + S L WAE+ + Sbjct: 395 EDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLEIVSGRPPYCKDKGFLIEWAKEFLEAPEAMSGLVDPELKHFNQEDLETVCEVASQCLNRDPTNNNNNHNKPSVQELCETLESRISLSISAEL-RSSSLAWAELAL 662
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26 Identity = 78/254 (30.71%), Postives = 126/254 (49.61%), Query Frame = 3 Query: 69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----------------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPL 779 E +F +I+ LS+++H+N V+L+GFC+EE +M+V+EY NGTL ++I +K E LD+ MRLRIA+G A + ++H + NPPI H + +S + L + AK++D + +M +VY+ GV+L E+ TG P + + Y SG + VD +SS +E LEK L C R + + RP+M ++ L I + P+ + K + L Sbjct: 663 EKEFLTEIELLSRLHHRNLVSLLGFCDEEGE--QMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESG--SILSTVDKRMSSVPDECLEKFATLALRCCREETDARPSMAEVVRELEIIWELMPESHVAKTADL 912
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24 Identity = 67/234 (28.63%), Postives = 117/234 (50.00%), Query Frame = 3 Query: 75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN----EIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734 +F + ++S ++HKN L+G+C E+ M+V+EY +G+L +H+ + S+ L W R+RIA+G A +E++H+ +PP+ H + SS + L + +LSD N + +VY+FGV++ E++TGR PY D+G SL WA L + L + VDP L + E + +++ CV +P RP + ++ L+ + Sbjct: 457 EFSHIVSSISSIHHKNMAELVGYCSEQG--RNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPY--DSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRL 686
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.319e-24 Identity = 67/222 (30.18%), Postives = 110/222 (49.55%), Query Frame = 3 Query: 96 TLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVQPLQQFVDPTLSS-FDEEQLEKLGELIKSCVRADPEKRPTMRDIAAIL 725 +LSK+ H+N L+G+C E+ M+V+EY NG+L E +H+ + S+ L W R+RIA+G A +E++H+ +P + H + SS + L D +LSD +VY+FGV++ E++TGR+P+ + SL WA L + L DP L + + L + ++I CV+ +PE RP M ++ L Sbjct: 453 SLSKIRHQNIAELVGYCSEQGH--NMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKFYLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEAL 672
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.217e-23 Identity = 67/238 (28.15%), Postives = 118/238 (49.58%), Query Frame = 3 Query: 75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED----WAADYLSGVQPLQQFVDPTLS-SFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734 +F + ++ + + H N V L+G+C E + R++V+EY NGTL + +H + + L W R+ +A+G A LE++H++ PPI H S+ V L +D + +SD I+ + +VY+FGV++ E++TGR+ Y D E WA L + L + VDP+L+ + + L ++I CV+++PE RP M ++ L ++ Sbjct: 527 EFIELVNNIDMIRHSNIVELVGYCAEHD--QRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFDSGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDLLDM 762
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.711e-23 Identity = 75/247 (30.36%), Postives = 124/247 (50.20%), Query Frame = 3 Query: 75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSL----EDWAADYLSGVQPLQQFVDPTL--SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI---TGITPD 752 +F+ +I+ LS+V+HKN V L+GFC +++ +M+V+EY PNG+L + + K LDW RL+IA+G L ++H+L +PPI H + S+ + L E AK++D + E M +VY FGV++ E++TG+ P +D GS D + LQ+ +D T+ +S + + EK ++ CV + RPTM ++ L I G+ P+ Sbjct: 674 EFKTEIELLSRVHHKNVVKLLGFCFDQKE--QMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP--IDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPN 916
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23 Identity = 69/240 (28.75%), Postives = 117/240 (48.75%), Query Frame = 3 Query: 69 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA----------MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY--LVDNGS--LEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLEKLGELIKSCVRADPEKRPTMRDIAAILREI 734 E +F + ++ + ++ H N V L+GFC E R+++ EY NGTL + +HI + L W +R+RIA+ A LE++H++ +PP H S+ + L +D +SD I+ + +VY+FGV++ E++TGR Y D G L WA L + L + VDP+L + + L ++I CV+++PE RP M ++ L ++ Sbjct: 518 EGKFLELVNNIDRIRHANIVQLVGFCSEHSQ--RLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVVQDLSDM 755
BLAST of FC872980 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22 Identity = 71/246 (28.86%), Postives = 119/246 (48.37%), Query Frame = 3 Query: 75 QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL-DWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE-DWAADYLSGVQPLQQFVDPTLSSFDE----EQLEKLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 761 +F ++ LS++NH++ V L+G C E E T +V+E+ PNG LF+HIH + ++ WGMRLRIA+ +A L ++H + PI H + S+ + L E Y K+SD + W + + +VY+FGV+L E++TG P + + S E AD+ +F + + + EQ+ + L + C+ + +KRP MR + L +I D + Sbjct: 491 EFINEVVILSQINHRHVVKLLGCCLETEVPT--LVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILASQEDSLV 734 The following BLAST results are available for this feature:
BLAST of FC872980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872980 ID=FC872980; Name=FC872980; organism=Citrus clementina; type=EST; length=860bpback to top |