FC873014

Overview
NameFC873014
Unique NameFC873014
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length607
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873014 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 2
Query:   11 GKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 133
            GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:  191 GKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of FC873014 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 2
Query:    2 NLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 133
            +LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:  187 DLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
The following BLAST results are available for this feature:
BLAST of FC873014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PSBQ_ONOVI1.700e-1178.05Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ2_ARATH6.459e-1170.45Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI2BE09FM1 AbsDev Citrus clementina cDNA clone KN0AAI2BE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873014 ID=FC873014; Name=FC873014; organism=Citrus clementina; type=EST; length=607bp
GAACCTCACTGGAAAGCTCTTCCAGACCATCGGCAATCTTGACCATGCGG
CAAAGATTAAGAGCACTCCTGAAGCAGAGAAATACTATGCTGAGACTGTA
TCTACCCTGAACGATGTTCTCTCCAAGGTTGGCTAAGCAGAATTAATATA
ATCTGATGTAAACTATATTTTTCATTTTGTGAGGCAACAACTTCTGTGAA
TTTTATTGCAAGCTGGCGTTCCGCTCAAAGTATCGAGAATAATTTGTCCA
GGGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCC
CCCTTTTTTTTTTTAAGGGGGGTTTTAAAAAAAAAATTTTTTTTTTTTTT
TTTTGGGGCGAAAGGGGCCCCCCCTCAAAAAAAAAAAATTTTTTTTTCCC
CCCCCCCGAACCCCCCCCCGGGGGGGGATATATAAGGGGTGTTCTTTTTT
TTCGGGGCGCCCCGGCCGGGGTTTTATTTATTGGGTGTTTTTTTGGGAAA
AAAAAAA
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