FC873063

Overview
NameFC873063
Unique NameFC873063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length341
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10211 contig Ccv1_Contig10211:127..467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 2.363e-49
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLD QPELFIHIIPDKTNNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:    9 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.363e-49
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLD QPELFIHIIPDKTNNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:    9 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 8.979e-49
Identity = 98/108 (90.74%), Postives = 102/108 (94.44%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLD QPELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:    9 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 1.532e-48
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   10 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.532e-48
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   10 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 2.000e-48
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   10 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.000e-48
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   10 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 1.098e-46
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISNSSDALD IRFESLTDKSKLD QPELFI ++PDK+N TLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:    9 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 116
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.434e-46
Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISN+SDALD IRFESLTDKSKLDAQPELFI ++PDKTN TLSIIDSG+GM KADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:   14 FQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVS 121
[Close]
BLAST of FC873063 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.530e-43
Identity = 89/109 (81.65%), Postives = 100/109 (91.74%), Query Frame = 3 
Query:   18 FHADITLMMSLIINTFYSNKEIFLRELISNSSDALDNIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA-DVS 341
            F A+I  ++SLIINTFYSNKEIFLRELISN+SDALD IRFESLTDKS ++AQPELFI ++PDK + TLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGA DVS
Sbjct:   19 FQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNVNAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVS 127
The following BLAST results are available for this feature:
BLAST of FC873063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP83_ARATH2.363e-4991.67Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH2.363e-4991.67Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP80_SOLLC8.979e-4990.74Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP81_ORYSJ1.532e-4889.81Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.532e-4889.81Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.000e-4888.89Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.000e-4888.89Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP81_ARATH1.098e-4687.04Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI1.434e-4686.11Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE2.530e-4381.65Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CB11FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873063 ID=FC873063; Name=FC873063; organism=Citrus clementina; type=EST; length=341bp
AGGGCCATTCCAACGTCTTTCATGCTGACATCACCCTGATGATGAGTTTG
ATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCAT
CAGCAACTCCTCCGATGCATTGGATAACATCAGATTTGAAAGCTTGACAG
ACAAGAGCAAGCTAGATGCCCAACCAGAGCTTTTCATCCACATTATCCCT
GATAAGACCAACAACACTTTGTCTATTATTGACAGTGGCATTGGCATGAC
TAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGGACCA
AAGAGTTCATGGAGGCATTGGCTGCAGGGGCGGATGTGAGC
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