FC873065

Overview
NameFC873065
Unique NameFC873065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length800
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11522 contig Ccv1_Contig11522:1618..2418. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_DICDI (Protein SEY1 homolog OS=Dictyostelium discoideum GN=DDB_0206311 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.424e-15
Identity = 59/213 (27.70%), Postives = 103/213 (48.36%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEAGKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDEKPDKVESLLFSSLMDGTAAASLPRDRSIGDSVDPLASSMWEEVSPQDKLITPVQ-CKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMI 647
            +F   +  F++D+  V+ ++   R    + +  K  E A  + +RM+ RF   FN DN +LPR WT  +DI +I +DAR  + +L+ + + +RLDE+   V    F  L                D+ +   ++M        K+I P + C      F+   +    QA+S  E ++  +    P + I+ + VLGFNEFI ++ +PL L++
Sbjct:  641 EFRDRLVDFQLDEQKVNELINKFREQLADGLKNKITERAEFLQMRMRKRFEEKFNMDNRNLPRKWTKTDDIASIFQDARQNAEKLIDLFSYLRLDEEDSNVS--FFKRL----------------DNDEHEENTMVN----SSKIIIPYKDCCLACENFRLTIKSDYMQALS--EQNRLTSGGGVPGYMIILLCVLGFNEFISIISSPLLLLL 829          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_COCIM (Protein SEY1 OS=Coccidioides immitis GN=SEY1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.276e-12
Identity = 65/243 (26.75%), Postives = 118/243 (48.56%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDEKPDKVESLLFSSLMDGTAAASLPRDRS----IGDSVDPLASSMWEEVSPQDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV----AYLLLRA-LWVQMDIAAE 707
            +F+   + F+     VD  +  LR  A  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI  +   AR ++L L+ +++  RL E     +       +  T +A+ P D      IG  VD    S+ EE++    +++  + + L  +FK   +      + A+ +       +P  + IL +A LG+NE I +L+NP+Y  +LF+    AY++ +  LW  M   AE
Sbjct:  570 RFTERASSFDASLEEVDVGLWRLRRKAWGVLRSKIDEEMMEGNLLLKLRENFEDKFRYDSAGVPRIWRPTDDIEGLYTKARESTLTLIPLLSRFRLQETNATPQ---LDRWVGYTPSAATPADEEDLVPIG-GVDDDGKSLEEEMT----MLSETKRQDLTVRFKKAADGVY---VEAKRSAIGGMTQIPVYFYILLLA-LGWNEIIAVLRNPVYFFMLFLCSVAAYIIYQLNLWGPMVKMAE 800          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_UNCRE (Protein SEY1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.774e-11
Identity = 54/217 (24.88%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDEKPDKVESLLFSSLMDGTAAASLPRDRSIGDSVDPLASSMWEEVSPQDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  A  V+  K  EE   G +L+++++ F   F +D   +PR+W   +DI  +   AR ++L L+ +++  RL E     +   +      +A  +   D +    VD    S+ EE++    +++  + + L  +FK   +      + A+ +       +P  + IL +A LG+NE + +L+NPLY  +LF+
Sbjct:  571 RFTERASSFDASLEEVDVGLWRLRRKAWGVLRSKIDEEMMEGNLLLKLRENFEDKFRYDAAGVPRIWRPTDDIEGLYTKARESTLTLIPLLSRFRLRETDTPPQLDRWVGYTPSSATPADEEDLAPIGGVDDDGMSLEEEMT----MLSESKRQDLTVRFKKAADGVY---VEAKRSAIGGMTQIPVYFYILLLA-LGWNEIVAVLRNPLYFFMLFL 779          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_PARBA (Protein SEY1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.774e-11
Identity = 55/229 (24.02%), Postives = 103/229 (44.98%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDE--KPDKVESLLFSSLMDGTAAASLPRDRS----IGDSVDPLASSMWEEVS------PQDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  +  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI +I   AR ++L L+ +++  RL E   P  ++  +       T +++ P D      IG   +    S+ EE++       QD  +    C  ++ + K      +TQ                P +    +  LG+NE + +L+NP Y ++LFV
Sbjct:  573 RFTERASSFDASIDEVDVGLWRLRRKSWGVLRAKIDEEMMEGNILLKLRENFEDKFRYDDAGVPRIWRPNDDIESIYTRARESTLTLIPLLSRFRLSETNAPPPLDKWI-----GHTPSSATPADEEDLTPIGGVDEDEGKSLEEEMTMIGEAKKQDLTVRSRNCDGVYVEAKRSAIGGITQV---------------PLYFYGLLLALGWNEIVAVLRNPAYFLLLFV 781          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_ASPOR (Protein sey1 OS=Aspergillus oryzae GN=sey1 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 55/231 (23.81%), Postives = 101/231 (43.72%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDEKPDKVESLLFSSLMDGTAAASLPRDRSIGDSVDPLASSMWEEVSP--------------QDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  +  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI  I   AR ++L L+ +++  RLDE                  +A  P DR IG +     S+  E+++P              +  +++  + + L  +FK   +    +A    +          P +    +  LG+NE I +L+NP Y  +LFV
Sbjct:  565 RFTDRASSFDASLEEVDVGLWRLRRKSWGVLRAKIDEEMIEGNLLLKLRENFEDKFRYDDAGVPRIWRPTDDIEGIYTRARESTLTLIPLLSKFRLDE-----------------TSAPPPLDRWIGHTPSSATSADEEDLAPIGGVDEEEGKSLEEEMTIVSDAKRQELTVRFKKAADGVYVEA----KRSAIGGMTQVPLYFYGLLLALGWNEIIAVLRNPAYFFLLFV 774          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_ASPFN (Protein sey1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=sey1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 55/231 (23.81%), Postives = 101/231 (43.72%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDEKPDKVESLLFSSLMDGTAAASLPRDRSIGDSVDPLASSMWEEVSP--------------QDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  +  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI  I   AR ++L L+ +++  RLDE                  +A  P DR IG +     S+  E+++P              +  +++  + + L  +FK   +    +A    +          P +    +  LG+NE I +L+NP Y  +LFV
Sbjct:  564 RFTDRASSFDASLEEVDVGLWRLRRKSWGVLRAKIDEEMIEGNLLLKLRENFEDKFRYDDAGVPRIWRPTDDIEGIYTRARESTLTLIPLLSKFRLDE-----------------TSAPPPLDRWIGHTPSSATSADEEDLAPIGGVDEEEGKSLEEEMTIVSDAKRQELTVRFKKAADGVYVEA----KRSAIGGMTQVPLYFYGLLLALGWNEIIAVLRNPAYFFLLFV 773          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_AJECG (Protein SEY1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 55/223 (24.66%), Postives = 105/223 (47.09%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDE--KPDKVESLLFSSLMDGTAAASLPRDRS----IGDSVDPLASSMWEEVSPQDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  +  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI ++   AR ++L L+ ++A  +L E   P  ++  +       T +++ P D      IG   D    S+ EE++    LI   + + L  +FK   +    +A    +          P +    +  LG+NE + +L+NP+Y ++LFV
Sbjct:  572 RFTERASSFDAGLDEVDVGLWRLRRKSWGVLRAKIDEEMMEGNLLLKLRENFEDKFRYDDAGVPRIWRPTDDIESVYSQARESTLTLIPLLARFKLAETNAPPPLDKWI-----GHTPSSATPADEEDLTPIGGVDDDEGKSLEEEMT----LIGEAKKQDLTVRFKKTADGVYVEA----KRSAIGGITQVPLYFYGLLFALGWNEILAVLRNPVYFLLLFV 781          
BLAST of FC873065 vs. ExPASy Swiss-Prot
Match: SEY1_AJECN (Protein SEY1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SEY1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 54/223 (24.22%), Postives = 105/223 (47.09%), Query Frame = 3
Query:   12 KFSTAIAGFEMDQAAVDTMVQNLRSYARNVVVKKAREEA--GKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRTITKDARAASLRLLSVMAAIRLDE--KPDKVESLLFSSLMDGTAAASLPRDRS----IGDSVDPLASSMWEEVSPQDKLITPVQCKSLWRQFKAETEYTVTQAISAQEAHKKNNNWMPPPWAILAMAVLGFNEFILLLKNPLYLMILFV 656
            +F+   + F+     VD  +  LR  +  V+  K  EE   G +L+++++ F   F +D+  +PR+W   +DI ++   AR ++L L+ ++A  +L E   P  ++  +       T +++ P D      IG   D    S+ EE++    LI   + + +  +FK   +    +A    +          P +    +  LG+NE + +L+NP+Y ++LFV
Sbjct:  572 RFTERASSFDASLDEVDVGLWRLRRKSWGVLRAKIDEEMMEGNLLLKLRENFEDKFRYDDAGVPRIWRPTDDIESVYSQARESTLTLIPLLARFKLAETNAPPPLDKWI-----GHTPSSATPADEEDLTPIGGVDDDEGKSLEEEMT----LIGEAKKQDITVRFKKTADGVYVEA----KRSAIGGITQVPLYFYGLLFALGWNEILAVLRNPVYFLLLFV 781          
The following BLAST results are available for this feature:
BLAST of FC873065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SEY1_DICDI2.424e-1527.70Protein SEY1 homolog OS=Dictyostelium discoideum G... [more]
SEY1_COCIM3.276e-1226.75Protein SEY1 OS=Coccidioides immitis GN=SEY1 PE=3 ... [more]
SEY1_UNCRE2.774e-1124.88Protein SEY1 OS=Uncinocarpus reesii (strain UAMH 1... [more]
SEY1_PARBA2.774e-1124.02Protein SEY1 OS=Paracoccidioides brasiliensis (str... [more]
SEY1_ASPOR4.731e-1123.81Protein sey1 OS=Aspergillus oryzae GN=sey1 PE=3 SV... [more]
SEY1_ASPFN4.731e-1123.81Protein sey1 OS=Aspergillus flavus (strain ATCC 20... [more]
SEY1_AJECG6.179e-1124.66Protein SEY1 OS=Ajellomyces capsulata (strain ATCC... [more]
SEY1_AJECN8.070e-1124.22Protein SEY1 OS=Ajellomyces capsulata (strain NAm1... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAI2CC01FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873065 ID=FC873065; Name=FC873065; organism=Citrus clementina; type=EST; length=800bp
CTGCTGTATTGAAGTTTTCAACTGCAATTGCTGGTTTTGAAATGGATCAA
GCTGCAGTTGACACAATGGTGCAAAATTTAAGGAGCTATGCAAGGAATGT
TGTGGTGAAAAAAGCAAGAGAAGAAGCTGGAAAAGTTCTGATCCGCATGA
AGGACAGATTCTCAACAGTCTTCAATCATGACAATGACTCTTTGCCAAGG
GTTTGGACTGGAAAAGAGGACATCAGGACAATAACAAAGGATGCTCGTGC
CGCATCATTGAGGCTTTTATCTGTCATGGCTGCCATACGCTTGGATGAGA
AACCAGATAAAGTTGAGAGTTTGCTGTTTTCCTCTCTAATGGACGGAACT
GCTGCTGCATCATTGCCTCGGGATAGGAGTATAGGAGATTCTGTTGACCC
TCTTGCCTCAAGCATGTGGGAGGAGGTTTCTCCACAAGATAAGCTGATAA
CACCAGTGCAATGCAAATCTTTGTGGAGACAGTTTAAAGCAGAAACTGAG
TATACAGTTACTCAAGCTATTTCCGCGCAGGAGGCTCACAAGAAGAATAA
CAACTGGATGCCTCCTCCTTGGGCAATTTTGGCAATGGCTGTACTTGGTT
TTAACGAGTTCATACTCCTCTTAAAGAATCCTCTTTACCTCATGATTTTG
TTTGTTGCATATCTGCTTTTGAGAGCCTTATGGGTACAGATGGACATTGC
GGCGGAGTTTCGACATGGAGCTCTGCCAGGCATTCTTTCCATTTCATCAA
AGTTTCTTCCTACTATTATGAACCTCATCANGCGATTGGCTGAGGAGGCT
back to top