FC873071

Overview
NameFC873071
Unique NameFC873071
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15539 contig Ccv1_Contig15539:10..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_CAEEL (Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.871e-31
Identity = 80/246 (32.52%), Postives = 122/246 (49.59%), Query Frame = 2
Query:   44 MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVGDG-TWD---SWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            M +  + +  + +    F   ++ +P ++ HG+GD C N      VK+  E      G   + +++G   T D    ++    E   + C K+K   EL  GYN +G SQG    R V + C   PP+KN VS+GG H G    P C G  I C     LI    Y  +VQ  +  + Y   PN + +Y ++  FL  +NNE  +  N TYK     L+NLVL+ F  D +++PK+++WFG+Y DG
Sbjct:    1 MRYFPLLLCLLAITTAEFRNATKQVPVVMWHGMGDCCCNPLSMGSVKKLFEE--QIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNE--NNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDG 241          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT3_DICDI (Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum GN=ppt3 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26
Identity = 76/230 (33.04%), Postives = 120/230 (52.17%), Query Frame = 2
Query:   68 SFITVLLLFFFPVSRSIPFIVLHGIGD-QCSNQGVKQFTENLSSFSGSKGYCIEVGDGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            S I ++ L    VS + P +++HG+   + S + +K + E   S        +E+G+G +DS F  ++ Q E   + V+   +L+ G+N++G SQG LI R  V+     P V N++S  GP  G    P     +     + ++    Y   +Q  L+ + Y K P+ I KYLE+  FL  +NNE   K N+TYKE  + L  +VL    +DK +IPKE+ WF +Y DG
Sbjct:    6 SLILLIALAIALVSATRPVVLMHGVTTGKESMEPLKSWIEE--SIPDIYVLNVEIGNGAFDSIFTTMDSQIEEFAQVVQADPKLANGFNLIGFSQGTLIARAFVQ-RYNNPQVYNYISWNGPQGGQFGTPF----VNIPWVDKVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKLNAMVLTYSTNDKTIIPKESGWFSFYADG 227          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PDF1_SCHPO (Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 OS=Schizosaccharomyces pombe GN=pdf1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24
Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 2
Query:   65 ISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYCIEVGDGTWDS----WFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG-SGIFC-IIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGY 742
            IS   V L      S  +P ++ HG+GD  ++  + + ++ +   +    Y I VGD  ++     +   LE+Q + VC+ +     LS G+  +GLSQG L  R + + C+    +++ ++LG PH+G  ++P C  + + C  + ++++   ++  ++Q+H+  + Y +      KYLE  KFL  LNNE+     +   E+   L NLV + F+ D ++ P  +  FG+
Sbjct:    9 ISLDKVRLAINDGASEQLPVVIWHGLGDTPTSFTLTEVSQRVQKLTKGAVYAIRVGDNEFEDIKAGYLGKLEDQLDEVCDLIGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKELDNLVAVSFERDDIVEPPYSTGFGW 239          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_MACFA (Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 67/223 (30.04%), Postives = 104/223 (46.64%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQTLAKDPKLQQGYNAMGFSQGGQFLRAVAQRCP-SPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSG 250          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_HUMAN (Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23
Identity = 67/223 (30.04%), Postives = 104/223 (46.64%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVCQALAKDPKLQQGYNAMGFSQGGQFLRAVAQRCP-SPPMINLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSG 250          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_BOVIN (Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22
Identity = 65/223 (29.15%), Postives = 104/223 (46.64%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            +P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q   VC+ + K  +L +GYN +G SQG    R V + C   PP+ N +S+GG H G   +P C   S   C      + A  Y+  +Q+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G
Sbjct:   33 LPLVIWHGMGDSCCNPLSMGAIKKMVEK--KIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCP-SPPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE--RGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSG 250          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_MOUSE (Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22
Identity = 66/222 (29.73%), Postives = 103/222 (46.40%), Query Frame = 2
Query:  119 PFIVLHGIGDQCSNQG----VKQFTENLSSFSGSKGYCIEVGDGTWD----SWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            P ++ HG+GD C N      +K+  E      G     +E+G    +    S+F  +  Q  +VC+ ++K  +L +GYN +G SQG    R V + C   PP+   +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YK+    L+  V++ F +D ++ P ++ WFG+Y  G
Sbjct:   34 PLVIWHGMGDSCCNPMSMGVIKKMVEK--EIPGIYVLSLEIGKNMMEDVENSFFLNVNVQVNMVCQILEKDPKLQQGYNAIGFSQGGQFLRAVAQRCP-TPPMMTLISVGGQHQGVFGLPRCPGESSHICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQE--RCVNESYKKNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSG 250          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_RAT (Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.088e-22
Identity = 66/222 (29.73%), Postives = 102/222 (45.95%), Query Frame = 2
Query:  119 PFIVLHGIGDQCSNQ----GVKQFTENLSSFSGSKGYCIEVG----DGTWDSWFKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--SGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            P ++ HG+GD C N      +K+  E      G     +E+G    +   +S+F  +  Q  + C+ ++K  +L  GYN +G SQG    R V + C   PP+   +S+GG H G   +P C   S   C      + A  YS  VQ+ L  + Y   P     Y     FL  +N E     N +YKE    L+  V++ F +D ++ P ++ WFG+Y  G
Sbjct:   34 PLVIWHGMGDSCCNPMSMGSIKKMVEK--EIPGIYVLSLEIGKNMVEDVENSFFLNVNLQVGMACQILEKDPKLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQER--HINESYKENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSG 250          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT1_DROME (Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 2
Query:  116 IPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC--IEVGDGTWDSW----FKPLEEQTEIVCEKVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF--CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYYPDG 754
            +P ++ HG+GD C          NL       GY   +++G      W    F    EQ + VC+++ + + L++GY+ +G SQG    R V E C   PP++N ++LGG H G   +P+C +     C     L+    Y+  VQ  L  + Y   P    KY     FL  +NNEL    N  Y E    L+  V++ F +D ++ PKE+ WF YY  G
Sbjct:   41 LPVVLWHGMGDTCCVPFSLGAIMNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQVDYVCKQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCP-NPPMRNLITLGGQHQGIFGLPMCPTLTEKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENLQKLKKFVMVQFLNDTIVQPKESQWFQYYTTG 258          
BLAST of FC873071 vs. ExPASy Swiss-Prot
Match: PPT2B_XENLA (Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-B PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.015e-13
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  320 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKERFSCLQNLVLIMFKDDKVLIPKETAWFGYY 745
            +G +++  SQG LI RG++E       V  F++L  P  G   + L       ++  + ++   Y  + ++ ++  GY + P+   KYLE   FLPKLNNEL D  ++  K  F  L+ LVLI   DD+V+ P +++ FG+Y
Sbjct:   89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISALQEVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKLVLIGGPDDEVIAPWQSSHFGFY 228          
The following BLAST results are available for this feature:
BLAST of FC873071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PPT1_CAEEL2.871e-3132.52Palmitoyl-protein thioesterase 1 OS=Caenorhabditis... [more]
PPT3_DICDI3.632e-2633.04Palmitoyl-protein thioesterase 3 OS=Dictyostelium ... [more]
PDF1_SCHPO1.526e-2427.16Palmitoyl-protein thioesterase-dolichyl pyrophosph... [more]
PPT1_MACFA2.204e-2330.04Palmitoyl-protein thioesterase 1 OS=Macaca fascicu... [more]
PPT1_HUMAN2.204e-2330.04Palmitoyl-protein thioesterase 1 OS=Homo sapiens G... [more]
PPT1_BOVIN1.865e-2229.15Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=... [more]
PPT1_MOUSE5.427e-2229.73Palmitoyl-protein thioesterase 1 OS=Mus musculus G... [more]
PPT1_RAT7.088e-2229.73Palmitoyl-protein thioesterase 1 OS=Rattus norvegi... [more]
PPT1_DROME9.258e-2231.22Palmitoyl-protein thioesterase 1 OS=Drosophila mel... [more]
PPT2B_XENLA6.015e-1333.10Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CC07FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873071 ID=FC873071; Name=FC873071; organism=Citrus clementina; type=EST; length=754bp
AATAAAATAAAAAAAGGAACCTTTTGATCGCATCAGCATTTTCATGGCTT
TTCGCTCAGTACCCATTTCTTTCATTACCGTCTTGCTCTTGTTTTTCTTT
CCAGTTTCTCGTTCGATTCCCTTCATAGTACTCCATGGTATTGGAGACCA
GTGTTCCAATCAAGGAGTGAAACAGTTCACCGAAAATCTTAGCAGTTTTT
CAGGTTCTAAAGGATATTGCATAGAAGTTGGGGATGGGACATGGGATTCC
TGGTTTAAGCCTCTGGAGGAACAGACAGAAATTGTTTGTGAAAAGGTGAA
GAAAATGAAAGAACTGAGTGAAGGTTACAACATAGTTGGTCTCTCCCAGG
GTAACTTAATAGGTCGAGGTGTTGTAGAGTTCTGCGAAGGTGGACCTCCG
GTTAAGAACTTTGTTTCCTTGGGAGGGCCTCATGCTGGTACTGCTTCTGT
GCCCCTTTGTGGTTCTGGTATCTTTTGCATAATTGCAAACAACCTAATCA
AGGCAGAGGTCTACAGTGACTATGTCCAAGATCATTTGGCTCCCAGTGGA
TATCTTAAATTTCCAAATGACATCCCCAAGTATTTGGAAAAATGTAAGTT
CCTTCCAAAGCTTAACAACGAACTCCCTGATAAGAGGAACTCCACTTACA
AGGAACGCTTCAGCTGCTTGCAAAACTTAGTGCTTATAATGTTCAAGGAT
GACAAGGTTTTGATACCCAAGGAAACAGCCTGGTTCGGATATTATCCAGA
TGGG
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