FC873074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULTO (Probable spermidine synthase OS=Sulfolobus tokodaii GN=speE PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17 Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQ--PFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEED 414 DP++ P LYTK FYE + +++ GI P+ E FS IYNTIK VFK V A +VP+F WG+V ASD+ P + EEI+NRIK RI+ L + +G + ++ ++ K + L E + T E+ Sbjct: 161 DPIKDSPSQMLYTKEFYEEV--KRISKWGIVTQATSPSFSL---ETFSIIYNTIKHVFKKVSAGITYVPAFDGLWGFVYASDEVNPAEFSKEEINNRIKERIDGSLRFYDGETHITMFSIPKHIREVLEKENKISTREN 294
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULSO (Probable spermidine synthase OS=Sulfolobus solfataricus GN=speE PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN+ G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+D++I RI+ +L + +G S S ++ K + T + TE+D ++ Sbjct: 162 DPIKNSTSYMLYTKEFYEK-LREILNERGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVDSKINERIDGQLRFYDGYSHKISFSLPKNIKSEFQKITKISTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIY (Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIN (Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIM (Probable spermidine synthase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIL (Probable spermidine synthase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIK (Probable spermidine synthase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULIA (Probable spermidine synthase OS=Sulfolobus islandicus (strain M.16.27) GN=speE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASDQPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP++ Y LYTK FYE+ L+ LN G VTQA EV+ +IYNTIK+VFK A ++ SF WG+V +P ++ +E+++RI+ RI+ +L + + S S ++ K + T V TE+D ++ Sbjct: 162 DPIKDSTSYMLYTKEFYEK-LRGILNQGGGIVTQATSPSFSL--EVYVTIYNTIKEVFKEASASYTYMASFDGLWGFVYGGVRPDLLSEDEVNSRIRERISGQLRFYDDYSHKISFSLPKNIKSEFKKITKVSTEKDPIYV 299
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_SULAC (Probable spermidine synthase OS=Sulfolobus acidocaldarius GN=speE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEEIDNRIKSRINAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEED 414 DP++ P LYT FY R LK + NG VTQA + F+ IY+T+K VFK+V A +VPSF WG++ ASD P +N +I++RIK R+ L + +G + + K + + NE V T E+ Sbjct: 161 DPIQDSPSQLLYTSEFY-RDLKSIITPNGGLVTQATSPSFSL--DTFAIIYSTLKTVFKNVSAGITYVPSFDGLWGFIYASDVTNPAHLNRNQINDRIKERVTGSLRFYDGETHEMLFRVPKYIREKIENEKRVSTREN 296
BLAST of FC873074 vs. ExPASy Swiss-Prot
Match: SPEE_AERPE (Probable spermidine synthase OS=Aeropyrum pernix GN=speE PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14 Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 4 DPVEGGPCYQLYTKSFYERILKPKLNDNGIFVTQAGPAGIFTHKEVFSSIYNTIKQVFKHVVAYTAHVPSFADTWGWVMASD--QPFSINAEE-IDNRIKSRI-NAELLYLNGASFLSSTTMNKAVYLSLLNETHVYTEEDARFI 426 DP+E GP +LY++ +Y R++K +N G+FVTQA T E + I NT+ +VFKHV +Y +VPSF WG+V+ASD P + + R+ ++ AEL +L+ AS L + K ++ E T ++ F+ Sbjct: 171 DPLEAGPATRLYSEEYY-RMVKDVMNPGGVFVTQAVSISHLT--EYHAIIRNTVARVFKHVESYGVYVPSFDSMWGFVVASDDKDPRILGDRGFFETRLSHQLQGAELRFLDYASMLHMLNIPKMYREAIAREKRYATLDNQVFL 312 The following BLAST results are available for this feature:
BLAST of FC873074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873074 ID=FC873074; Name=FC873074; organism=Citrus clementina; type=EST; length=733bpback to top |