FC873076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.167e-36 Identity = 73/89 (82.02%), Postives = 84/89 (94.38%), Query Frame = 2 Query: 521 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 +++R E+YLFK+V+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VY Sbjct: 4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.053e-35 Identity = 72/90 (80.00%), Postives = 84/90 (93.33%), Query Frame = 2 Query: 518 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 S+++ E+YLFK+V+IGDSAVGKSNLL+R+AR+EF NSK+TIGVEFQTQ M+I GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VY Sbjct: 3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVY 92
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31 Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = 2 Query: 506 MAFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 MA Y +D DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++I+GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 1 MAGYKADDEY-DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 93
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.349e-31 Identity = 68/91 (74.73%), Postives = 79/91 (86.81%), Query Frame = 2 Query: 515 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 Y E + DY+FKVVLIGDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ + I+ + VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVY Sbjct: 8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVY 98
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.068e-31 Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 2 Query: 509 AFYSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 A Y ED DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 3 AGYRAEDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVY 94
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
BLAST of FC873076 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 4.007e-31 Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 527 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVY 787 D DYLFKVVLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVY Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVY 91 The following BLAST results are available for this feature:
BLAST of FC873076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873076 ID=FC873076; Name=FC873076; organism=Citrus clementina; type=EST; length=789bpback to top |