FC873077

Overview
NameFC873077
Unique NameFC873077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1181 contig Ccv1_Contig1181:166..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873077 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.250e-11
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query:   40 LDCFIKTLKNDGPMAFYKGFLPNFGRLGSWNVIMFLTLEQAKKFVRSIE 186
            LDC IK +  +GP AFYKGF P+F RLGSWNV+MF+T EQ K+ +  ++
Sbjct:  257 LDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRALMKVQ 305          
The following BLAST results are available for this feature:
BLAST of FC873077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCP3_HUMAN8.250e-1157.14Mitochondrial uncoupling protein 3 OS=Homo sapiens... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI2CD03FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873077 ID=FC873077; Name=FC873077; organism=Citrus clementina; type=EST; length=602bp
AGGCGAGGATGATGGGGGATTCTGCATAAAAAAGCACAACTGGATTGCTT
CATTAAGACTCTGAAGAATGATGGGCCGATGGCATTTTATAAGGGTTTCC
TACCAAACTTTGGACGACTAGGATCATGGAATGTGATCATGTTTTTAACC
TTAGAGCAGGCCAAAAAATTTGTCAGAAGCATAGAATCATCATCTTAAGC
TTACAGATGAAGATCAATCCTCAGTTTATGAATTTTGCATCGGCAATTGC
CATGGAAGTTATTTAGAGATAATAAAGTTTCTGCATGTCATTGTTCTCCT
CATTTGAGCAATTCAGATGAGTTAGTGTCGGCAAGAGACAACCAATTGAT
GATCGAAAAGAGGTTTTAGCAACTCAGAAACATTCAAATAATTGTCATTT
TTTTTTTTCGGGGATTTTTATCCCATTAATAGATTGAAAATGAAATTATT
GATTTTCCCTTCAGGTTGCTTGGTATTTCCTTTTCCAAATATAAAGTTCC
AACTTTGTTGTGAAGACATGGGTTTCCCATCCACTGTTCATTTTGGTGGA
GAAAAATAACTAATGGATGAATTATTACCCGTAAAAAAAAAAAAAAAAAA
AA
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