FC873101

Overview
NameFC873101
Unique NameFC873101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1996 contig Ccv1_Contig1996:188..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 326
            TREEI+CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEACAHPFFDDLRDPN  LPNGR LP LFNFTAQELAGAS ELRQRLIP H +
Sbjct:  359 TREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRDPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 466          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 5.360e-53
Identity = 96/108 (88.89%), Postives = 100/108 (92.59%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHAR 326
            TREEI+CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEACAHPFFDDLR PN  LPNGR LP LFNFTAQELAGAS ELRQRLIP H +
Sbjct:  355 TREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRAPNVSLPNGRALPPLFNFTAQELAGASTELRQRLIPAHCQ 462          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.696e-49
Identity = 89/109 (81.65%), Postives = 99/109 (90.83%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEI+CMNPNYT+F+FPQIKAHPWHK+FHKRMPPEA+DL SRLLQYSPSLRCTALEACAHPFF++LR+PN  LPNGRPLP LFNF  QEL+GAS EL  RLIPEH R+
Sbjct:  293 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNF-KQELSGASPELINRLIPEHVRR 400          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.133e-49
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEI+CMNPNYT+F+FPQIKAHPWHK+FHKRMPPEA+DL SRLLQYSPSLRCTALEACAHPFF++LR+PN  LPNGRPLP LFNF  QEL GAS EL  RLIPEH R+
Sbjct:  291 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNF-KQELGGASMELINRLIPEHVRR 398          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.330e-48
Identity = 90/109 (82.57%), Postives = 96/109 (88.07%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKR PPEA+DLVSRLLQYSP+LR TA+EA  HPFFD+LRDPNT LPNGR LP LFNF  QEL GAS EL  +LIP+HARK
Sbjct:  295 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRTPPEAVDLVSRLLQYSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARK 403          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.157e-47
Identity = 89/109 (81.65%), Postives = 94/109 (86.24%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEIKCMNPNY EFKFPQIKAHPWHKIFHKRMPPEA+DLVSRLLQYSP+LRCTALEA  H FFD+LRDPNT LPNGR LP LFNF A EL G S E   +L+PEHARK
Sbjct:  294 TREEIKCMNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELRDPNTRLPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARK 402          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 84/109 (77.06%), Postives = 93/109 (85.32%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEA+DL+ R  QYSP+LRCTALEAC HP FD+LRDPNT LPNGRPLP LFNF  QEL+G   E+  RL+PEHARK
Sbjct:  304 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARK 412          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.791e-47
Identity = 84/109 (77.06%), Postives = 97/109 (88.99%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEI+CMNP+YT+F+FPQIKAHPWHKIFHKRMPPEA+D  SRLLQYSPSLRCTALEACAHPFFD+LR+PN  LPNGRP P LFNF  QE+AG+S EL  +LIP+H ++
Sbjct:  261 TREEIRCMNPHYTDFRFPQIKAHPWHKIFHKRMPPEAIDFASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNF-KQEVAGSSPELVNKLIPDHIKR 368          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.791e-47
Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEA+DL+ R  QYSP+LRCTA+EAC HPFFD+LRDPN  LPNGRPLP LFNF  QEL+G   E   RL+PEHARK
Sbjct:  303 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTAVEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARK 411          
BLAST of FC873101 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.670e-46
Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 3
Query:    3 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEALDLVSRLLQYSPSLRCTALEACAHPFFDDLRDPNTCLPNGRPLPTLFNFTAQELAGASNELRQRLIPEHARK 329
            TREEIKCMNPNYTEFKFPQIKAHPWHKIF KRMPPEA+DLVSRLLQYSP+LR TALEA  HPFFD+LRDPNT LPNGR LP LFNF A EL G   E+  +L+P HARK
Sbjct:  295 TREEIKCMNPNYTEFKFPQIKAHPWHKIFRKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRHLPPLFNFKANELKGVPAEMLVKLVPSHARK 403          
The following BLAST results are available for this feature:
BLAST of FC873101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
KSG8_ARATH6.332e-5489.81Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA5.360e-5388.89Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG6_ARATH4.696e-4981.65Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH6.133e-4981.65Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG5_ARATH2.330e-4882.57Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK1_TOBAC1.157e-4781.65Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
KSG10_ARATH2.577e-4777.06Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG7_ARATH9.791e-4777.06Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG4_ARATH9.791e-4776.15Shaggy-related protein kinase delta OS=Arabidopsis... [more]
MSK2_MEDSA1.670e-4679.82Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CF12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CF12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873101 ID=FC873101; Name=FC873101; organism=Citrus clementina; type=EST; length=711bp
CAACAAGAGAAGAAATTAAGTGCATGAATCCAAATTACACAGAATTTAAG
TTCCCTCAAATTAAAGCTCATCCATGGCATAAGATATTTCACAAACGAAT
GCCCCCTGAAGCACTGGATCTTGTCTCAAGGTTGCTTCAGTATTCACCAA
GCCTACGATGCACTGCTTTGGAGGCATGTGCACACCCCTTCTTTGATGAT
TTGAGAGACCCCAATACTTGTTTGCCAAATGGGCGACCCCTACCTACTCT
TTTCAATTTCACTGCTCAAGAATTGGCTGGTGCCTCTAATGAATTGCGAC
AACGTCTTATCCCGGAGCACGCAAGGAAATGATTTGATGACTGAGATGGA
TCCATATGCAATATAAATCAATTTTTGGATGCTTAGGTATGCCACAAGCC
ATTGTGCCCTACAGGGCAACCGATTTTTTTCCCTTCACCAATGAGTTGGT
TCGTGGCTGGGAGGCTGCTCAAGGATTTTTATGATGAATCTGCTGATGGG
AGTGAGTTGTGGATGGAAGAAGGTTTGACATTTATTTTCTAATTAGCAAT
GTTTAATTTGTTTTATGTCTCAATTATGAAAGCTTGAGTTATTCCAGATA
TGTCTGTCATATATTGTTTACATTATTCGTTGTGGAAAACTAACTTGACA
TTATCAAGTTGATGAATTAGGATGGCGTTCTTGGTGTATAAAAAAAAAAA
AAAAAAAAAAA
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