FC873107

Overview
NameFC873107
Unique NameFC873107
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6122 contig Ccv1_Contig6122:26..808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_RAT (Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_HUMAN (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_BOVIN (Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65
Identity = 119/191 (62.30%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.184e-65
Identity = 120/191 (62.83%), Postives = 150/191 (78.53%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGHVGVY+RGGALL T + PGFHL LP IT ++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APGI I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHVGVYYRGGALLTTTSGPGFHLMLPFITSFKSVQSTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLISSAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHNLQEVYIELFDQIDEDLKLALQKDLNLMAPGIIIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN2_XENTR (Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.464e-65
Identity = 118/191 (61.78%), Postives = 151/191 (79.06%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGHVGVY+RGGALL + + PGFHL LP IT ++ VQ T+QTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDKT I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHVGVYYRGGALLTSTSGPGFHLMLPFITSFKSVQSTMQTDEVKNVPCGTSGGVMIYFDRIEVVNYLIPSAVYDIVKNYTADYDKTLIFNKIHHELNQFCSVHNLQEVYIELFDQIDENLKLALQKDLNSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN1_MOUSE (Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.030e-63
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKRA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN1_PONAB (Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.346e-63
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKA 214
[Close]
BLAST of FC873107 vs. ExPASy Swiss-Prot
Match: ERLN1_HUMAN (Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.346e-63
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 2 
Query:  209 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMA 781
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKA 214
The following BLAST results are available for this feature:
BLAST of FC873107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERLN2_RAT1.101e-6562.30Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1[more]
ERLN2_PONAB1.101e-6562.30Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1[more]
ERLN2_MOUSE1.101e-6562.30Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1[more]
ERLN2_HUMAN1.101e-6562.30Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1[more]
ERLN2_BOVIN1.101e-6562.30Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1[more]
ERL2B_XENLA4.184e-6562.83Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1[more]
ERLN2_XENTR5.464e-6561.78Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1[more]
ERLN1_MOUSE1.030e-6360.21Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1[more]
ERLN1_PONAB1.346e-6360.21Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2[more]
ERLN1_HUMAN1.346e-6360.21Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2CG07FM1 AbsDev Citrus clementina cDNA clone KN0AAI2CG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873107 ID=FC873107; Name=FC873107; organism=Citrus clementina; type=EST; length=783bp
ATTCTCTCGCGCACATTTTGGCAACAGTTGAAACCCCGCCATGGATCCAC
AGCAACAAGGAGTAGGCGCTACACAGGCACAGCCTCGGCCTCAGCCTCAG
CCTGGCGATTCGTCTGCTATACTCGCCGTGTTCCTCACTTTCATCGCTAT
TGTCTCACTGATATTGATCCCATCATCGTCATCCATCAAAAGTAGCCTGG
CCATTTTGCACCAAATTCCAGAAGGCCACGTTGGAGTATATTGGAGAGGA
GGTGCCCTTCTAGAGACAATTACACACCCAGGCTTCCATCTGAAGTTGCC
TTTGATAACACACTACGAGCCTGTTCAAGTGACCCTTCAGACAGATCAGG
TTACTGACATTCCATGTGGGACCAAAGGGGGTGTAATGATCAACTTTGAG
AAGATAGAGGTTGTTAACCGGCTTCGTAAGGAATATGTGTACGAGACTCT
GCGCGACTATGGCGTGCAATATGACAAGACATGGATATATGACAAGATTC
ATCATGAGATCAATCAGTTCTGTAGTTCTCATAGTCTGCAACAAGTCTAT
ATTGATGTGTTTGATCAGATTGACGAAAAGATGAAGGATGCTCTTCAGGT
TGACTGCACGCGTTATGCTCCAGGCATTGAAATTATCAGTGTGCGTGTTA
CAAAGCCTACTATTCCAGATAGAATCAGAAGAAATTTTGAACAAATGGAA
GAGGAACGTACTAGGGTGTTAATTGCTATTGAGAAACAGAAAGTAGCTGA
GAAAGAGGCAGAGACAAGCAAAAAGATGGCTAT
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