FC873118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 268.855 bits (686), Expect = 2.658e-71 Identity = 134/265 (50.57%), Postives = 183/265 (69.06%), Query Frame = 2 Query: 59 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 M KGPGL+ DIGKKA+DLL KDY++D+K +ISTYS GVA+TS+ KKG L GDV Q K KN+ D+KVDT SN+ TT T+ E P KAI S KVP+ SGK+E+QY H++A +S++ L +P ++ ++ IGT ++AFGA+ +DT G TK A ++ K D S+ L +KGD + ASY H ++ L +A +I+ RFST ENTFT+G +A+D LT VK ++ N GK AL+QHE PKSL+TISSE + A+EK+ Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKS 265
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 5.543e-69 Identity = 129/265 (48.68%), Postives = 179/265 (67.55%), Query Frame = 2 Query: 59 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 M KGPGL++DIGKKA+DLL +DY +D K +++TYS GVA+T++ +KKG L DV+ Q K KN+ DVKVDT SN+ TT T+ E P K I S VPD SGK+E+QY H++A ++I L SP ++ + G ++A G + +DT +GNFTK AG+S + D AS+ L DKGDT+ ASY H + + +A E+T FS+NENT T+G + +D LT VKA++N++GK AL+QHE PKSL TIS E + A+EK+ Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKS 265
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 7.239e-69 Identity = 132/264 (50.00%), Postives = 172/264 (65.15%), Query Frame = 2 Query: 59 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEK 850 M KGPGL+ +IGKKA+DLL KDY +D K SI+TYS GV +TS+ KKG L DV Q K KNV D+KVDT SN+ TT T+ E P K I S +VPD SGKLEVQY HD+A +++ L +P ++ + +GT IA G + +DT +G+FTK AG+S T D AS+ L +KGD + ASY H + L +A E+ FSTNEN TVG + +D LT VKA++NN GK ALLQHE PKSL T+S E + +++K Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDK 264
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 253.062 bits (645), Expect = 1.509e-66 Identity = 127/265 (47.92%), Postives = 183/265 (69.06%), Query Frame = 2 Query: 59 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 M KGPGL+ +IGKKA+DLL KD+N+DQK SI+T+S AGVA+TST KKG L GDVA Q + KN+ D+KV T+S L T T+ E P ++I S KVPD NSGK+E+QY H++A ++++ L Q+P ++ + IG+ +A G + +DT SGNFTK AG+S TK D AS+ + DKGD + ASY H ++ L +A E++ + S+ ++T TVG +++D LT VKA++N+ G AL+QHE PKS TIS E + +++K+ Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKS 265
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 249.98 bits (637), Expect = 1.278e-65 Identity = 123/262 (46.95%), Postives = 181/262 (69.08%), Query Frame = 2 Query: 68 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 GPGL+ +IGKKA+DLL +DY D K +++TY+ GVA+T+T+ KK L G++ +Q K KN+ DVK +++SN++TT T+ E+ P K+I S VPD SGK E+QY HD+A +++I L SP +++++ GT ++A GA+ DT +GN TKY AG+S + D AS+ L +KGD++ ASY +H+ N +A E+T FS+NEN+ T G + +D LTVVKA+ NN GK ALLQHE PKS+ TIS+E + A++K+ Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASY-YHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKS 263
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 248.825 bits (634), Expect = 2.847e-65 Identity = 126/266 (47.37%), Postives = 171/266 (64.29%), Query Frame = 2 Query: 59 MSKGPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 M KGPGL+ +IGKKA+DLL +DY DQK S++TYS GVA+T+T KG L GDVA Q K N DVKV T+S++LTT T E P K I K+PD+ SGK EVQYFHD+A ++++ +P ++ + +GT ++ G + Y+T SGNF + AG + TK D AS+IL DKG+ + ASY + S VG EI+ F+T EN TVG +A+D LT VKA++NN G AL+QHE PKS T+S E + A++K+ Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASY---YQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKS 263
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.562e-63 Identity = 122/264 (46.21%), Postives = 178/264 (67.42%), Query Frame = 2 Query: 68 GPGLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEIL-PSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVG-EITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 GPGL++ IGKKAKDLL +DY D K +++TY+ G A+T+T+ KK L+ G++ +Q K KN+ DVK ++ SN++TT T ++ P K I S VPD SGK+E+QY HD+A ++I L +P ++++ GT ++A GA+ DT + NF KY A +S T D AS+ L +KGD++ ASY H ++ K AVG E+T FS+NEN+ T G + +D LT+VKA++NN GK AL+QHE +PKSL TIS+E + A+EK+ Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVE--KSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKS 264
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.015e-54 Identity = 107/261 (41.00%), Postives = 164/261 (62.84%), Query Frame = 2 Query: 74 GLFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEI-LPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISSEGEH*ALEKT 853 GL+ DIGKK +DLL KDYN QK ++T S GVA+T+ +K G++ Q K K + DVK ++ES++LTT T+ E P K+I +L VPD SGKLE QY H++A +++ LN +P ++++ G+ +++ G + +DT + +FTKY A +S+T PD AS+ L + GDT+ ASY H + N +A E++ S NE+T G +++D T +K + NN+G AL+QHE PKS +TIS + + A+EK+ Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKS 266
BLAST of FC873118 vs. ExPASy Swiss-Prot
Match: VDAC_DROME (Voltage-dependent anion-selective channel OS=Drosophila melanogaster GN=porin PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 57/266 (21.43%), Postives = 117/266 (43.98%), Query Frame = 2 Query: 71 PGLFADIGKKAKDLLTKDYNAD-QKISISTYSGAGVALTST--AVKKGGLSAGDVAAQYKYKN--VLFDVKVDTESNILTTFTLTEILPSTKAIASLKV---------PDYNSGKLEVQYFHDHATFTSAIALN-QSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDNLKKSAAVGEITRRFSTNENTFTVGGSYAVDHLTVVKAKLNNHGKLGALLQHEVIPKSLLTISS 823 P ++D+GK+A+D+ +K YN K+ + T + +G+ + + ++ G G + +YK K+ + K +T++ + TE+ + + LK+ +GK +V Y H++ S + ++ + P I+ +A +G G + +DT T + T D + D + + + D L +++ T+ F +G Y +D V+AK+NN ++G Q ++ LT+S+ Sbjct: 3 PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTL-----FTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQRTSDKLDVGV---QLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLST 260 The following BLAST results are available for this feature:
BLAST of FC873118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873118 ID=FC873118; Name=FC873118; organism=Citrus clementina; type=EST; length=856bpback to top |