FC873125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYC_ORYSJ (Phytochrome C OS=Oryza sativa subsp. japonica GN=PHYC PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 + I HLEFR+ HPAPG+PE LI +MF HS GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A Sbjct: 1051 MQIAHLEFRLVHPAPGVPEALIQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVA 1123
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYC_ORYSI (Phytochrome C OS=Oryza sativa subsp. indica GN=PHYC PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.615e-25 Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 + I HLEFR+ HPAPG+PE LI +MF HS GASREGLGLYISQKLVK M+GTVQY+RE+E SSF++L+EFP+A Sbjct: 1051 MQIAHLEFRLVHPAPGVPEALIQEMFRHSPGASREGLGLYISQKLVKTMSGTVQYLRESESSSFIVLVEFPVA 1123
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYC_SORBI (Phytochrome C OS=Sorghum bicolor GN=PHYC PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.158e-23 Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 + I HLEFRI HPAPG+PE LI +MF H+ SREGLGLYI QKLVK M+GTVQY+REA+ SSF+ILIEFP+A Sbjct: 1049 MQIAHLEFRIVHPAPGVPEALIQEMFRHNPEVSREGLGLYICQKLVKTMSGTVQYLREADTSSFIILIEFPVA 1121
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY_PICAB (Phytochrome OS=Picea abies PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.377e-21 Identity = 46/73 (63.01%), Postives = 61/73 (83.56%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLA 225 ++++H+EFRITH GIPE+LI +MF H+Q +EGLGLY+ Q+LVK+MNG VQY+REA RSSF+I +EFPLA Sbjct: 1059 VNVMHMEFRITHSGQGIPEELIKEMFVHNQDMFQEGLGLYMCQQLVKIMNGDVQYLREAGRSSFIINVEFPLA 1131
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY1_SELMA (Phytochrome 1 OS=Selaginella martensii GN=PHY1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21 Identity = 45/82 (54.88%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 252 +H++HLEFRITHP G+PE+L+ +MF +G ++EGLGL + +KLVKLMNG V+YIREA ++ FL+ +E PLA + DA K Sbjct: 1048 VHVMHLEFRITHPGVGLPEELVQEMFDRGRGMTQEGLGLSMCRKLVKLMNGEVEYIREAGKNYFLVSLELPLAQRDDAGSVK 1129
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY_PINSY (Phytochrome OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-19 Identity = 44/82 (53.66%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 7 IHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDADKTK 252 +H+VHLEFRITHP G+P +L+ D+F SQ A++EG+GL + +KL+KLMNG V+YIRE+ FL+ +EFP+A ++DA K Sbjct: 1050 LHVVHLEFRITHPGLGLPAELVQDLFDRSQWATQEGVGLSMCRKLLKLMNGDVRYIRESGICYFLVNVEFPMAQREDAASIK 1131
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYA_CUCPE (Phytochrome A OS=Cucurbita pepo GN=PHYA PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.121e-18 Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 1 KNIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQ 231 K++H+VHLEFRIT+ GIPE L+++MF + AS EG L IS+KLVKLMNG V+Y+REA +SSF+I +E AH+ Sbjct: 1044 KSVHLVHLEFRITYAGGGIPESLLNEMFGSEEDASEEGFSLLISRKLVKLMNGDVRYMREAGKSSFIITVELAAAHK 1120
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY2_CERPU (Phytochrome 2 OS=Ceratodon purpureus GN=PHY2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.260e-18 Identity = 37/79 (46.84%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 4 NIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 240 N+H++HLEFR++HP G+P++L+ +M+ ++G ++EGLGL + +KLV+LMNG VQY+RE + F++ +E P+A + DA Sbjct: 1039 NVHVMHLEFRVSHPGGGLPDELVLEMYDRAKGMTQEGLGLNMCRKLVRLMNGDVQYVRENAQCYFVVYVELPMAQRDDA 1117
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHY1_PHYPA (Phytochrome 1 OS=Physcomitrella patens GN=PHY1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.564e-18 Identity = 38/79 (48.10%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 4 NIHIVHLEFRITHPAPGIPEKLIHDMFYHSQGASREGLGLYISQKLVKLMNGTVQYIREAERSSFLILIEFPLAHQKDA 240 ++H+VHLEFR++HP G+PE+L+ +M+ +G ++EGLGL + +KLV+LMNG V Y+REA + F++ +E P+A + DA Sbjct: 1041 SVHVVHLEFRVSHPGAGLPEELVLEMYDRGKGMTQEGLGLNMCRKLVRLMNGDVHYVREAMQCYFVVNVELPMAQRDDA 1119
BLAST of FC873125 vs. ExPASy Swiss-Prot
Match: PHYC_ARATH (Phytochrome C OS=Arabidopsis thaliana GN=PHYC PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.491e-18 Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 1 KNIHIVHLEFRITHPAPGIPEKLIHDMFYH-SQGASREGLGLYISQKLVKLM-NGTVQYIREAERSSFLILIEFPL 222 K + V LEFRI HPAPG+PE L+ +MF +G SREGLGL+I+QKLVKLM GT++Y+RE+E S+F+IL EFPL Sbjct: 1035 KRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTLRYLRESEMSAFVILTEFPL 1110 The following BLAST results are available for this feature:
BLAST of FC873125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873125 ID=FC873125; Name=FC873125; organism=Citrus clementina; type=EST; length=828bpback to top |