FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 440.654 bits (1132), Expect = 4.671e-123
Identity = 219/252 (86.90%), Postives = 233/252 (92.46%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            I FA+WRR +P + FFDVPAE+D E+ LGQLKRFSLRELQVA+DGFSNKNILGRGGFGKVYKGRLADG LVAVKRLKEERT GGELQFQTEV++ISMAVHRNLL L GFC T TE+LLVY YMANGSVAS LRER  S PPLDWPTRK+IALGSARGLSYLH+HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH+TTAV GT+GHIAPEYLSTG+SSEKTDVFGYGIMLLELITGQRAFD A
Sbjct:  257 IAFAWWRRRKPLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLA 508          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 432.18 bits (1110), Expect = 1.661e-120
Identity = 213/252 (84.52%), Postives = 230/252 (91.27%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            I  A+WRR +P + FFDVPAE+D E+ LGQLKRFSLRELQVA+D FSNKNILGRGGFGKVYKGRLADG LVAVKRLKEERT GGELQFQTEV++ISMAVHRNLL L GFC T TE+LLVY YMANGSVAS LRER  S PPLDWP R++IALGSARGL+YLH+HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH+TTAV GT+GHIAPEYLSTG+SSEKTDVFGYG+MLLELITGQRAFD A
Sbjct:  244 IALAWWRRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 495          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 2.399e-119
Identity = 214/252 (84.92%), Postives = 229/252 (90.87%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            + FA+WRR +P EFFFDVPAE+D E+ LGQLKRFSLRELQVATD FSNKNILGRGGFGKVYKGRLADG LVAVKRLKEERT GGELQFQTEV++ISMAVHRNLL L GFC T TE+LLVY YMANGSVAS LRER  S  PL W  R++IALGSARGLSYLH+HCDPKIIHRDVKAANILLDEEFEAVVGDFGLA+LMDYKDTH+TTAV GT+GHIAPEYLSTG+SSEKTDVFGYGIMLLELITGQRAFD A
Sbjct:  260 LAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLA 511          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 415.231 bits (1066), Expect = 2.101e-115
Identity = 205/252 (81.35%), Postives = 224/252 (88.89%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            I FA+W R +P + FFDVPAE+D E+ LGQLKRF+LREL VATD FSNKN+LGRGGFGKVYKGRLADG LVAVKRLKEERT GGELQFQTEV++ISMAVHRNLL L GFC T TE+LLVY YMANGSVAS LRER    P LDWP RK IALGSARGL+YLH+HCD KIIHRDVKAANILLDEEFEAVVGDFGLAKLM+Y D+H+TTAV GT+GHIAPEYLSTG+SSEKTDVFGYG+MLLELITGQ+AFD A
Sbjct:  249 IAFAWWLRRKPQDHFFDVPAEEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLA 500          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 380.948 bits (977), Expect = 4.392e-105
Identity = 191/249 (76.71%), Postives = 212/249 (85.14%), Query Frame = 3
Query:   60 AYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            A+W R +    F DVPAE+D E+ LGQ KRFSLREL VAT+ FS +N+LG+G FG +YKGRLAD  LVAVKRL EERT GGELQFQTEV++ISMAVHRNLL L GFC T TE+LLVY YMANGSVAS LRER    P LDWP RK IALGSARGL+YLH+HCD KIIH DVKAANILLDEEFEAVVGDFGLAKLM+Y D+H+TTAV GT+GHIAPEYLSTG+SSEKTDVFGYG+MLLELITGQ+AFD A
Sbjct:  233 AWWLRRKLQGHFLDVPAEEDPEVYLGQFKRFSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLA 481          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.050e-90
Identity = 165/238 (69.33%), Postives = 195/238 (81.93%), Query Frame = 3
Query:   87 EFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + F DV  E D  +  GQLKRF+ RELQ+ATD FS KN+LG+GGFGKVYKG L D   VAVKRL +  + GG+  FQ EV++IS+AVHRNLL L GFCTT TE+LLVY +M N S+A RLRE ++  P LDW TRK+IALG+ARG  YLHEHC+PKIIHRDVKAAN+LLDE+FEAVVGDFGLAKL+D + T++TT V GT+GHIAPEYLSTG+SSE+TDVFGYGIMLLEL+TGQRA D
Sbjct:  257 DVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 494          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 8.322e-88
Identity = 161/251 (64.14%), Postives = 203/251 (80.88%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVP-AEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +GF ++R+ +       +   +++  L LG L+ F+ REL VATDGFS+K+ILG GGFG VY+G+  DG +VAVKRLK+   + G  QF+TE+++IS+AVHRNLL L G+C + +E+LLVY YM+NGSVASRL+ +    P LDW TRKKIA+G+ARGL YLHE CDPKIIHRDVKAANILLDE FEAVVGDFGLAKL++++D+H+TTAV GTVGHIAPEYLSTG+SSEKTDVFG+GI+LLELITG RA +
Sbjct:  253 LGFIWYRKKQRRLTMLRISDKQEEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK----PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 499          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.789e-86
Identity = 156/230 (67.83%), Postives = 186/230 (80.87%), Query Frame = 3
Query:  111 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + D E ++G LKRFS RE+Q AT  FS KNILG+GGFG VYKG L +G +VAVKRLK+   +G E+QFQTEV++I +AVHRNLL L GFC T  E++LVY YM NGSVA RLR+     P LDW  R  IALG+ARGL YLHE C+PKIIHRDVKAANILLDE FEA+VGDFGLAKL+D +D+H+TTAV GT+GHIAPEYLSTG+SSEKTDVFG+G+++LELITG +  D
Sbjct:  275 QQDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTG-EVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMID 503          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.609e-54
Identity = 104/223 (46.64%), Postives = 154/223 (69.06%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            L++ +  +L  AT+GF N +++G GGFG VYK +L DG +VA+K+L    +  G+ +F  E++ I    HRNL+ L G+C    E+LLVY YM  GS+   L +R+ +   L+WP R+KIA+G+ARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + R S K DV+ YG++LLEL+TG++  D A
Sbjct:  873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHV-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSA 1094          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.027e-53
Identity = 104/223 (46.64%), Postives = 153/223 (68.61%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            L++ +  +L  AT+GF N +++G GGFG VYK +L DG +VA+K+L    +  G+ +F  E++ I    HRNL+ L G+C    E+LLVY YM  GS+   L +R+     L+WP R+KIA+G+ARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + R S K DV+ YG++LLEL+TG++  D A
Sbjct:  873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHV-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSA 1094          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SERK1_ARATH4.671e-12386.90Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
BAK1_ARATH1.661e-12084.52BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH2.399e-11984.92Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK4_ARATH2.101e-11581.35Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH4.392e-10576.71Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH1.050e-9069.33Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH8.322e-8864.14Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH7.789e-8667.83Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE4.609e-5446.64Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC1.027e-5346.64Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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